RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 FUOMA2VDF0 154 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 FAM183AA6NL82 134 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF732B4DXR9 585 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 LY6LH3BQJ8 138 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 NOL3O60936 208 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 NOS1APO75052 506 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 RGS11O94810 467 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 NXPH2O95156 264 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 NDUFB2O95178 105 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF682O95780 498 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 RENP00797 406 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 IFNA14P01570 189 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 IGLV1-47P01700 117 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 RBMY1A1P0DJD3 496 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 INAFM2P0DMQ5 153 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 DCTDP32321 178 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 KDELR2P33947 212 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 BMI1P35226 326 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 SOX6P35712 828 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 NPBWR2P48146 333 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 HSPA13P48723 471 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 RAB7AP51149 207 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 GPM6AP51674 278 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 GNB1P62873 340 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF45Q02386 682 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 PRKCDQ05655 676 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 RAB40BQ12829 278 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 PRDX4Q13162 271 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 KRR1Q13601 381 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 KIAA0141Q14154 515 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 EIF2B1Q14232 305 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ATP6AP1Q15904 470 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 SMN1Q16637 294 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 LRRC36Q1X8D7 754 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 CEACAM21Q3KPI0 293 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 MESTQ5EB52 335 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OGFRL1Q5TC84 451 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ASPHD1Q5U4P2 390 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 SLX4IPQ5VYV7 408 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 LPCAT4Q643R3 524 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ETFRF1Q6IPR1 90 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 DPY19L2P2Q6ZN68 376 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 TRAPPC6BQ86SZ2 158 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 HAPLN4Q86UW8 402 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 Q8N402 240 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 ASCC1Q8N9N2 400 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OR4D6Q8NGJ1 314 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 MYOZ3Q8TDC0 251 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 HAVCR2Q8TDQ0 301 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 AQP3Q92482 292 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 PYURFQ96I23 114 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OR8B4Q96RC9 309 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OVOL2Q9BRP0 275 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 C9orf16Q9BUW7 83 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 GAL3ST2Q9H3Q3 398 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 Q9H521 79 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 GNB4Q9HAV0 340 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 PNRC2Q9NPJ4 139 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 CENPMQ9NSP4 180 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 DCAF13Q9NV06 445 aaKnown RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 EXTL2Q9UBQ6 330 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 OR14J1Q9UGF5 321 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 COPS3Q9UNS2 423 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 SLC22A13Q9Y226 551 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 PIGLQ9Y2B2 252 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 POLDIP2Q9Y2S7 368 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 AMMECR1Q9Y4X0 333 aaPredicted RBP3.92□□□□□ -1.78
CKAP4-203ENST00000553039 IER3IP1Q9Y5U9 82 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 COMMD3-BMI1R4GMX3 469 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 TRGV10A0A0A0MS01 117 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 TRBV5-7A0A0A0MS05 114 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 A0A0J9YWU9 116 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 H0YJX3 145 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 SOCS2O14508 198 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 GNGT2O14610 69 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 RRHO14718 337 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 MAGEB3O15480 346 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CST1P01037 141 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 IGKV1D-33P01593 117 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 IGKV1-33P01594 117 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 FABP3P05413 133 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 ZP3P21754 424 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CD40LGP29965 261 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CDKN2AP42771 156 aaKnown RBP3.91□□□□□ -1.78
CKAP4-203ENST00000553039 GRB2P62993 217 aaKnown RBP3.91□□□□□ -1.78
CKAP4-203ENST00000553039 EBI3Q14213 229 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 RBM39Q14498 530 aaKnown RBP3.91□□□□□ -1.78
CKAP4-203ENST00000553039 HLA-DRB5Q30154 266 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 AARDQ4LEZ3 155 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CYBRD1Q53TN4 286 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 FGD3Q5JSP0 725 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 LCN1P1Q5VSP4 162 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 HAGHLQ6PII5 290 aaPredicted RBP3.91□□□□□ -1.78
CKAP4-203ENST00000553039 HEPN1Q6WQI6 88 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 PQLC2Q6ZP29 291 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 KCTD9Q7L273 389 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 FAM122BQ7Z309 247 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 LYG2Q86SG7 212 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms