RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GPR148Q8TDV2 347 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 APH1BQ8WW43 257 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 TFAP2CQ92754 450 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 METTL9Q9H1A3 318 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEK3-204ENST00000552973 ZFP57Q9NU63 452 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 RPL36Q9Y3U8 105 aaKnown RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 SIRT4Q9Y6E7 314 aaPredicted RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 DSCAML1Q8TD84 2053 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 ZNF736B4DX44 427 aaPredicted RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 SLC31A2O15432 143 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 MPZL2O60487 215 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 CSTBP04080 98 aaKnown RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 GZMHP20718 246 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 ZNF93P35789 620 aaPredicted RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 ETV1P50549 477 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 ZNF816Q0VGE8 651 aaPredicted RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 DEFB136Q30KP8 78 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 DDI2Q5TDH0 399 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 OR2G6Q5TZ20 316 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 UNQ9370/PRO34162Q6UXP9 181 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 SLC16A12Q6ZSM3 486 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 OR10A7Q8NGE5 316 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 OR13C5Q8NGS8 318 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 NEK7Q8TDX7 302 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 TMEM106AQ96A25 262 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 RAX2Q96IS3 184 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 P2RX4Q99571 388 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 S100A13Q99584 98 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 MCRIP2Q9BUT9 160 aaKnown RBP9.03□□□□□ -0.96
NEK3-204ENST00000552973 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
NEK3-204ENST00000552973 CCL24O00175 119 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 CD2P06729 351 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 BDKRB2P30411 391 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 GPR12P47775 334 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 RBM11P57052 281 aaKnown RBP9.02□□□□□ -0.97
NEK3-204ENST00000552973 PPP3R1P63098 170 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 PAX5Q02548 391 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 EBI3Q14213 229 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 PNLIPRP3Q17RR3 467 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 SLC22A6Q4U2R8 563 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 KLHL22Q53GT1 634 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 ZFP1Q6P2D0 407 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 RPL22L1Q6P5R6 122 aaKnown RBP9.02□□□□□ -0.97
NEK3-204ENST00000552973 TEX38Q6PEX7 206 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 COMMD1Q8N668 190 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 Q8N9W7 124 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 CYYR1Q96J86 154 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 B9D2Q9BPU9 175 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 C9orf16Q9BUW7 83 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 ABCG5Q9H222 651 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 DCLRE1BQ9H816 532 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 TMEM138Q9NPI0 162 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.97
NEK3-204ENST00000552973 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
NEK3-204ENST00000552973 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 A0A1W2PPK0 400 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 MAGEA13PA6NCF6 341 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 AP4M1O00189 453 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 MT-ND4P03905 459 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 LUMP51884 338 aaPredicted RBP9.01□□□□□ -0.97
NEK3-204ENST00000552973 DGCR2P98153 550 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 GPR50Q13585 617 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 TGIF2LXQ8IUE1 241 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 PRR18Q8N4B5 295 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 Q8N6K4 173 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 ZFP41Q8N8Y5 198 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 OR4K15Q8NH41 348 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 RTN4IP1Q8WWV3 396 aaPredicted RBP9.01□□□□□ -0.97
NEK3-204ENST00000552973 ZNF184Q99676 751 aaPredicted RBP9.01□□□□□ -0.97
NEK3-204ENST00000552973 RASL11BQ9BPW5 248 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 IFT22Q9H7X7 185 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 FGF20Q9NP95 211 aaPredicted RBP9.01□□□□□ -0.97
NEK3-204ENST00000552973 PLSCR3Q9NRY6 295 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 IL36GQ9NZH8 169 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 CLEC2DQ9UHP7 191 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 TRAPPC2LQ9UL33 140 aa9.01□□□□□ -0.97
NEK3-204ENST00000552973 H0YHG0 523 aa9□□□□□ -0.97
NEK3-204ENST00000552973 AIPO00170 330 aa9□□□□□ -0.97
NEK3-204ENST00000552973 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
NEK3-204ENST00000552973 MOSP00540 346 aa9□□□□□ -0.97
NEK3-204ENST00000552973 LALBAP00709 142 aa9□□□□□ -0.97
NEK3-204ENST00000552973 GTF2F2P13984 249 aa9□□□□□ -0.97
NEK3-204ENST00000552973 IL3RAP26951 378 aa9□□□□□ -0.97
NEK3-204ENST00000552973 ZNF134P52741 427 aa9□□□□□ -0.97
NEK3-204ENST00000552973 F2RL1P55085 397 aa9□□□□□ -0.97
NEK3-204ENST00000552973 RIPK1Q13546 671 aa9□□□□□ -0.97
NEK3-204ENST00000552973 MPV17LQ2QL34 196 aa9□□□□□ -0.97
NEK3-204ENST00000552973 CCDC58Q4VC31 144 aa9□□□□□ -0.97
NEK3-204ENST00000552973 CXorf66Q5JRM2 361 aaPredicted RBP9□□□□□ -0.97
NEK3-204ENST00000552973 NHLRC3Q5JS37 347 aa9□□□□□ -0.97
NEK3-204ENST00000552973 SYT6Q5T7P8 510 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms