RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 C1orf87Q8N0U7 546 aa10.64□□□□□ -0.71
HDAC7-230ENST00000552960 OR51H1Q8NH63 302 aa10.64□□□□□ -0.71
HDAC7-230ENST00000552960 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
HDAC7-230ENST00000552960 DECR2Q9NUI1 292 aa10.64□□□□□ -0.71
HDAC7-230ENST00000552960 GAB2Q9UQC2 676 aa10.64□□□□□ -0.71
HDAC7-230ENST00000552960 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
HDAC7-230ENST00000552960 IGHV3-9P01782 118 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CD59P13987 128 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 PTGDSP41222 190 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 OR8G1Q15617 311 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-230ENST00000552960 BEND4Q6ZU67 534 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 GPR137CQ8N3F9 429 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CALHM2Q9HA72 323 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 DMXL2Q8TDJ6 3036 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 AKAP13Q12802 2813 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 PITX3O75364 302 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 PCOLCEQ15113 449 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF818PQ6ZRF7 136 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 RASL10BQ96S79 203 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 SPIN2AQ99865 258 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 SPIN2BQ9BPZ2 258 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 ANGPTL4Q9BY76 406 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 A0A1W2PR80 420 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 TNFSF11O14788 317 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CA11O75493 328 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 SCTP09683 121 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 PKIAP61925 76 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 IL11RAQ14626 422 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 LRTM2Q8N967 370 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 OR5T1Q8NG75 326 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CLDND2Q8NHS1 167 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 SPSB1Q96BD6 273 aa10.63□□□□□ -0.71
HDAC7-230ENST00000552960 LYRM2Q9NU23 88 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-230ENST00000552960 CHD3Q12873 2000 aaKnown RBP10.63□□□□□ -0.71
HDAC7-230ENST00000552960 PDCD6O75340 191 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 PTBP3O95758 552 aaKnown RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 IFNA5P01569 189 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 TK1P04183 234 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 PLA2G5P39877 138 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ADIRFQ15847 76 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 KCNMB1Q16558 191 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 HIST3H3Q16695 136 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF468Q5VIY5 522 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 CALHM1Q8IU99 346 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 SPACA9Q96E40 222 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 CCL28Q9NRJ3 127 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 PCNX2A6NKB5 2137 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 CDS2O95674 445 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 HSPB1P04792 205 aaKnown RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 IAPPP10997 89 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 DUSP3P51452 185 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ELLP55199 621 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 DHRS13Q6UX07 377 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 Q6ZPA2 131 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 MYPOPQ86VE0 399 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 NABP1Q96AH0 204 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 FREM1Q5H8C1 2179 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 CLDN34H7C241 214 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 IFNA10P01566 189 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF16P17020 682 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF32P17041 273 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 IL2RGP31785 369 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 APLNRP35414 380 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 PLA2G2CQ5R387 149 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 C9orf135Q5VTT2 229 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF787Q6DD87 383 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 SELENOHQ8IZQ5 122 aaKnown RBP10.62□□□□□ -0.71
HDAC7-230ENST00000552960 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 FOXJ2Q9P0K8 574 aa10.62□□□□□ -0.71
HDAC7-230ENST00000552960 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 MMP7P09237 267 aaPredicted RBP10.61□□□□□ -0.71
HDAC7-230ENST00000552960 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 ACP1P24666 158 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 LMO1P25800 156 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 MAS1LP35410 378 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 DBX2Q6ZNG2 339 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 PRR18Q8N4B5 295 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF611Q8N823 705 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 EXTL1Q92935 676 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 DSPP15924 2871 aaKnown RBP10.61□□□□□ -0.71
HDAC7-230ENST00000552960 IGLV3-1P01715 115 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 HBE1P02100 147 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 COX6A1P12074 109 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 CTSSP25774 331 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 ZNF92Q03936 586 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 UBALD1Q8TB05 177 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 IL1F10Q8WWZ1 152 aa10.61□□□□□ -0.71
HDAC7-230ENST00000552960 RBMXL1Q96E39 390 aaKnown RBP10.61□□□□□ -0.71
HDAC7-230ENST00000552960 SIRT7Q9NRC8 400 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms