RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 OR13F1Q8NGS4 319 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 OR9G1Q8NH87 305 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 DYRK2Q92630 601 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 GALMQ96C23 342 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 RAB3CQ96E17 227 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 AKR1E2Q96JD6 320 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 CMTM3Q96MX0 182 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 C12orf4Q9NQ89 552 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 DIABLOQ9NR28 239 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 IDI2-AS1Q9NZ38 188 aa8.4□□□□□ -1.06
TRAFD1-208ENST00000552890 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 IGHV2-26A0A0B4J1V2 119 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 NPIPB11E5RHQ5 1161 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 RNASEK-C17orf49H0YIS7 233 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 HSPB6O14558 160 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 TXNL1O43396 289 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 FCN3O75636 299 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 ARG1P05089 322 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 CD3GP09693 182 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 SAA4P35542 130 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 SOX6P35712 828 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 SERPINB10P48595 397 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 DYNLT3P51808 116 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 HTD2P86397 168 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 SRSF7Q16629 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 LY6G6FQ5SQ64 297 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 HES5Q5TA89 166 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 MZT2AQ6P582 158 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 RNF144BQ7Z419 303 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 ANKRD13BQ86YJ7 626 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 PNKDQ8N490 385 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 C15orf40Q8WUR7 153 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 CAPSLQ8WWF8 208 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 ARL11Q969Q4 196 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 YIPF6Q96EC8 236 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 COQ2Q96H96 371 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 OR51E2Q9H255 320 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 MBNL3Q9NUK0 354 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 DAPK2Q9UIK4 370 aa8.39□□□□□ -1.07
TRAFD1-208ENST00000552890 SMIM31A0A1B0GVY4 71 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 RNF212BA8MTL3 300 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 VGLL3A8MV65 326 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 F2RL2O00254 374 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 LDLRAD4O15165 306 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 TFF1P04155 84 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 GSTP1P09211 210 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 CGB3P0DN86 165 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 CGB7P0DN87 165 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 CCL3L1P16619 93 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 VEGFCP49767 419 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 RAB7AP51149 207 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 RORCP51449 518 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 FOXL1Q12952 345 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 UNC119Q13432 240 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 MADCAM1Q13477 382 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 PNLIPRP3Q17RR3 467 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 LRRC75BQ2VPJ9 315 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 C16orf87Q6PH81 154 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 BRD3OSQ6XYD6 125 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 C11orf42Q8N5U0 333 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 TPRX1Q8N7U7 411 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 SIGLECL1Q8N7X8 197 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 OR10R2Q8NGX6 335 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 OR10X1Q8NGY0 326 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 MRGPRDQ8TDS7 321 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 EDARADDQ8WWZ3 215 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 S100A16Q96FQ6 103 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 CMSS1Q9BQ75 279 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 FUNDC2Q9BWH2 189 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 ATG5Q9H1Y0 275 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 RABL2AQ9UBK7 228 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 SPATA2Q9UM82 520 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 RABL2BQ9UNT1 228 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 DSCAML1Q8TD84 2053 aa8.38□□□□□ -1.07
TRAFD1-208ENST00000552890 TMEM272A0A1B0GTI8 110 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 A0A1W2PP11 408 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 UBE2QL1A1L167 161 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 ODF3BA8MYP8 253 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 M0QZK8 103 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 TPPPO94811 219 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 CTXN2P0C2S0 81 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 DTYMKP23919 212 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 COX7A1P24310 79 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 NFYBP25208 207 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 CBX5P45973 191 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 TMBIM6P55061 237 aa8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 UBA52P62987 128 aaKnown RBP8.37□□□□□ -1.07
TRAFD1-208ENST00000552890 ACTG1P63261 375 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms