RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CCDC197Q8NCU1 140 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 PXT1Q8NFP0 134 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 PLPPR1Q8TBJ4 325 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 EME1Q96AY2 570 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 RNFT2Q96EX2 444 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 CHCHD6Q9BRQ6 235 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 POMPQ9Y244 141 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 MAGEB3O15480 346 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 GYG2O15488 501 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 TXNL1O43396 289 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 IGF1P05019 195 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF616Q08AN1 781 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 RSU1Q15404 277 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 ATP6AP1Q15904 470 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 ZSCAN26Q16670 478 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 LINC00311Q8N616 119 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 OR52M1Q8NGK5 317 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 RTN4IP1Q8WWV3 396 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 KCTD7Q96MP8 289 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 MYCBPQ99417 103 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 GPER1Q99527 375 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 DPCDQ9BVM2 203 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 PLSCR3Q9NRY6 295 aa11.06□□□□□ -0.64
CHMP1A-210ENST00000551981 TRAV39A0A0B4J263 110 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 TMEM30CPA0ZSE6 113 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 OR4C45A6NMZ5 311 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 FRMD6-AS1P0C7T7 363 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 RUNX1Q01196 453 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 PIGYQ3MUY2 71 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 OVCH2Q7RTZ1 564 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 FAM71E2Q8N5Q1 922 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 SUMF2Q8NBJ7 301 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 TMEM104Q8NE00 496 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 TNFAIP8L1Q8WVP5 186 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 MRPL48Q96GC5 212 aaKnown RBP11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 CIB1Q99828 191 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 FAM192AQ9GZU8 254 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 RIBC2Q9H4K1 309 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 ISYNA1Q9NPH2 558 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 VSIG4Q9Y279 399 aa11.05□□□□□ -0.64
CHMP1A-210ENST00000551981 J3QLW9 94 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 SAP30O75446 220 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF19P17023 458 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 FASP25445 335 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 ALKBH1Q13686 389 aaKnown RBP11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 LPCAT4Q643R3 524 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 PARP16Q8N5Y8 322 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 GABARAPL3Q9BY60 117 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 IMPAD1Q9NX62 359 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 GFOD1Q9NXC2 390 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 DHDHQ9UQ10 334 aa11.04□□□□□ -0.64
CHMP1A-210ENST00000551981 I3L521 148 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 GABRPO00591 440 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 OVOL1O14753 267 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 OR7C1O76099 320 aaPredicted RBP11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 RAB3AP20336 220 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 Q3ZCU0 254 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 SATL1Q86VE3 508 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 ACBD7Q8N6N7 88 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF491Q8N8L2 437 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 OR10K1Q8NGX5 313 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 TSEN15Q8WW01 171 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 TRUB1Q8WWH5 349 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 ST6GALNAC6Q969X2 333 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 C4orf36Q96KX1 117 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 IFT22Q9H7X7 185 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 RAB9BQ9NP90 201 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 GAR1Q9NY12 217 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 ST3GAL6Q9Y274 331 aa11.03□□□□□ -0.64
CHMP1A-210ENST00000551981 TMEM212A6NML5 194 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 C15orf65H3BRN8 121 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 J3QRE1 110 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 ORC5O43913 435 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 HTR3BO95264 441 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 GP9P14770 177 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 SPNP16150 400 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 F2RL1P55085 397 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 ASPHD1Q5U4P2 390 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 ZFAND6Q6FIF0 208 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 LINC00596Q86U02 117 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 OR6Q1Q8NGQ2 317 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 DCUN1D4Q92564 292 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 KLK15Q9H2R5 256 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 OR51J1Q9H342 316 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms