RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 APOL3O95236 402 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 SLC2A2P11168 524 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-220ENST00000551716 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 CST11Q9H112 138 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
CACNB3-220ENST00000551716 LOC107986453A0A1B0GWG9 222 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 METTL15A6NJ78 407 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 HSPB6O14558 160 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 ATP6V0E1O15342 81 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 SULT1C4O75897 302 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 MT-ND2P03891 347 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 ZNF20P17024 532 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 SSTR5P35346 364 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 RAB40BQ12829 278 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 MMDQ15546 238 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 TMEM244Q5VVB8 128 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-220ENST00000551716 TMEM236Q5W0B7 351 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 PYHIN1Q6K0P9 492 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 CNIH3Q8TBE1 160 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 FGGYQ96C11 551 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-220ENST00000551716 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 ADGRL4Q9HBW9 690 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 NDE1Q9NXR1 346 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 CEPT1Q9Y6K0 416 aa11.71□□□□□ -0.53
CACNB3-220ENST00000551716 TRAV24A0A0B4J272 114 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 SDCBPO00560 298 aaPredicted RBP11.7□□□□□ -0.54
CACNB3-220ENST00000551716 CD40LGP29965 261 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 ZNF137PP52743 207 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 TMEM267Q0VDI3 215 aaPredicted RBP11.7□□□□□ -0.54
CACNB3-220ENST00000551716 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 GATAD1Q8WUU5 269 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 RFT1Q96AA3 541 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 ST6GALNAC5Q9BVH7 336 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
CACNB3-220ENST00000551716 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
CACNB3-220ENST00000551716 TCRBV5S2A0A599 114 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 SHISA3A0PJX4 238 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 GNGT2O14610 69 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 RGS11O94810 467 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 CST1P01037 141 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 CSTBP04080 98 aaKnown RBP11.69□□□□□ -0.54
CACNB3-220ENST00000551716 TMEM225BP0DP42 221 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 ANXA8P13928 327 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 ZP3P21754 424 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 ELP2Q6IA86 826 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 LINC00322Q6ZN03 302 aaPredicted RBP11.69□□□□□ -0.54
CACNB3-220ENST00000551716 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
CACNB3-220ENST00000551716 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 OR5D18Q8NGL1 313 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 NR1H4Q96RI1 486 aaPredicted RBP11.69□□□□□ -0.54
CACNB3-220ENST00000551716 RAB9BQ9NP90 201 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
CACNB3-220ENST00000551716 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 A0A1W2PN81 502 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 CNIH1O95406 144 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 OR2T7P0C7T2 308 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 RAP2AP10114 183 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 ATP6V1B2P21281 511 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 BLVRBP30043 206 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-220ENST00000551716 CHRNA7P36544 502 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 VHLP40337 213 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 NXNL2Q5VZ03 156 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 STEAP3Q658P3 488 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 DHFR2Q86XF0 187 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 TMEM106AQ96A25 262 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 SPACA5Q96QH8 159 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 ZNF251Q9BRH9 671 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 RANGRFQ9HD47 186 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-220ENST00000551716 RETNQ9HD89 108 aa11.68□□□□□ -0.54
CACNB3-220ENST00000551716 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 ORC5O43913 435 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 ISG15P05161 165 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 ACTBP60709 375 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 IL13RA2Q14627 380 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 C5orf64Q2M2E5 130 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 ZNF660Q6AZW8 331 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-220ENST00000551716 DEFB107AQ8IZN7 70 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 Q8N402 240 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 PLPPR1Q8TBJ4 325 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 DNAJC9Q8WXX5 260 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 RHOVQ96L33 236 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 ANKRD60Q9BZ19 345 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 SLA2Q9H6Q3 261 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 MYRFQ9Y2G1 1151 aa11.67□□□□□ -0.54
CACNB3-220ENST00000551716 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 NBR2O15453 112 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 MAGEB3O15480 346 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 LANCL1O43813 399 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 PRKYO43930 277 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 IGHV3-11P01762 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms