RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DEFB125Q8N687 156 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 KLHDC1Q8N7A1 406 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 ZFP62Q8NB50 900 aaPredicted RBP4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 CHST4Q8NCG5 386 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 SOCS4Q8WXH5 440 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 ASB10Q8WXI3 467 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 BCL2L2Q92843 193 aaPredicted RBP4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 ARRDC3Q96B67 414 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 SPSB1Q96BD6 273 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 SMIM10Q96HG1 83 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 TSSK2Q96PF2 358 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 SIGLEC12Q96PQ1 595 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 OR5B12Q96R08 314 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 TXN2Q99757 166 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 APOOQ9BUR5 198 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 MEGF9Q9H1U4 602 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 OR51I2Q9H344 312 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 LIME1Q9H400 295 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF665Q9H7R5 613 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 RPRMQ9NS64 109 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 MRPL22Q9NWU5 206 aaKnown RBP4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 THAP10Q9P2Z0 257 aaPredicted RBP4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 B9D1Q9UPM9 204 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 VDAC3Q9Y277 283 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 EML5Q05BV3 1969 aa4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 TRIP12Q14669 1992 aaPredicted RBP4.53□□□□□ -1.68
LSM3P2-201ENST00000551246 COL4A6Q14031 1691 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 A0A1B0GV50 99 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SERTM2A0A1B0GWG4 89 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM189A5PLL7 270 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SERINC4A6NH21 518 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 LRRC3CA6NJW4 275 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 GLOD5A6NK44 160 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SERPINE3A8MV23 424 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 H0YJW9 148 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SOCS1O15524 211 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 XRCC2O43543 280 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 CD5LO43866 347 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SERF1AO75920 110 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 GOSR1O95249 250 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 H2BFMP0C1H6 154 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SMIM17P0DL12 118 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 RPS12P25398 132 aaKnown RBP4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 CD40P25942 277 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 S100A7P31151 101 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SSR2P43308 183 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 EMDP50402 254 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 RAC3P60763 192 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 NTHL1P78549 312 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 ARL6IP1Q15041 203 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM249Q2WGJ8 235 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TCEAL5Q5H9L2 206 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM200BQ69YZ2 307 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC18B1Q6NT16 456 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 Q6ZN92 141 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 LYZL2Q7Z4W2 148 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF440Q8IYI8 595 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 LGI3Q8N145 548 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 CDRT4Q8N9R6 151 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 FER1L6-AS1Q8NA97 138 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SYT8Q8NBV8 401 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 OR4N2Q8NGD1 307 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 OR52M1Q8NGK5 317 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 VN1R17PQ8TDU5 208 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5P3Q8WZ94 311 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM186Q96B77 213 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 REEP6Q96HR9 211 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 GMPPAQ96IJ6 420 aaPredicted RBP4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 CYYR1Q96J86 154 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF48Q96MX3 618 aaPredicted RBP4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TSPAN32Q96QS1 320 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 OR6C1Q96RD1 312 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 ATP5SQ99766 215 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 MACROD1Q9BQ69 325 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 NICN1Q9BSH3 213 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 LMF2Q9BU23 707 aaKnown RBP4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC46A2Q9BY10 475 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 HES4Q9HCC6 221 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF160Q9HCG1 818 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAPPC1Q9Y5R8 145 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 PLXND1Q9Y4D7 1925 aa4.52□□□□□ -1.69
LSM3P2-201ENST00000551246 NPIPA5A0A0B4J1W7 369 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LOC107986453A0A1B0GWG9 222 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 FEZF1A0PJY2 475 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF320A2RRD8 509 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 DIRC3C9JPN6 131 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 NPIPA7E9PJI5 369 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SIRPB1O00241 398 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 CXCL11O14625 94 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LMX1BO60663 402 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 NPIPB7O75200 414 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF253O75346 499 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 IGHMP01871 453 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 GYPAP02724 150 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 CRYGCP07315 174 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LINC00869P0C866 280 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms