RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 COMMD7Q86VX2 200 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 OR52M1Q8NGK5 317 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 LRBAP50851 2863 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 TPD52L2O43399 206 aaKnown RBP17.65■□□□□ 0.42
PRDM4-205ENST00000550376 FAM201AQ5SY85 155 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 ACP7Q6ZNF0 438 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 LIAT1Q6ZQX7 453 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 LRRC29Q8WV35 223 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 GALNT14Q96FL9 552 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 RIMS4Q9H426 269 aaPredicted RBP17.65■□□□□ 0.42
PRDM4-205ENST00000550376 IFT22Q9H7X7 185 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 COL6A6A6NMZ7 2263 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 DIDO1Q9BTC0 2240 aaKnown RBP17.64■□□□□ 0.41
PRDM4-205ENST00000550376 IGHV3OR15-7A0A075B7D8 119 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 LINC00862A6NCI5 91 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 BCL2L11O43521 198 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 TUSC2O75896 110 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 IFNA21P01568 189 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 EGR1P18146 543 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 TMEM268Q5VZI3 342 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 SLC35G3Q8N808 338 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 HES4Q9HCC6 221 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 NMBP08949 121 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 ZNF880Q6PDB4 577 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 WFDC8Q8IUA0 241 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 TMEM171Q8WVE6 324 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 TAF9BQ9HBM6 251 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 POLEQ07864 2286 aa17.64■□□□□ 0.41
PRDM4-205ENST00000550376 HSPA12AO43301 675 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 ZNF345Q14585 488 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 EIF2S3LQ2VIR3 472 aaKnown RBP17.63■□□□□ 0.41
PRDM4-205ENST00000550376 PRSS54Q6PEW0 395 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 SCARB1Q8WTV0 552 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 KIF25Q9UIL4 384 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 UBE2J1Q9Y385 318 aaPredicted RBP17.63■□□□□ 0.41
PRDM4-205ENST00000550376 TRBV6-7A0A0A0MS04 114 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 B3GALNT1O75752 331 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 SRSF7Q16629 238 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRDM4-205ENST00000550376 FAM169BQ8N8A8 192 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 C18orf12Q96KH6 178 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 OR2V2Q96R30 315 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 DCTN5Q9BTE1 182 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 MRPL37Q9BZE1 423 aaKnown RBP17.63■□□□□ 0.41
PRDM4-205ENST00000550376 TAAR3PQ9P1P4 343 aa17.63■□□□□ 0.41
PRDM4-205ENST00000550376 NXPH3O95157 252 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 NKX6-1P78426 367 aaPredicted RBP17.62■□□□□ 0.41
PRDM4-205ENST00000550376 COL10A1Q03692 680 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 OR4A4PQ8NGN8 299 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 OR51H1Q8NH63 302 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 GPR31O00270 319 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 MBPP02686 304 aaPredicted RBP17.62■□□□□ 0.41
PRDM4-205ENST00000550376 KLF3P57682 345 aaPredicted RBP17.62■□□□□ 0.41
PRDM4-205ENST00000550376 MOGAT3Q86VF5 341 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 OR1L1Q8NH94 360 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 OR2S2Q9NQN1 319 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 FBXO9Q9UK97 447 aaPredicted RBP17.62■□□□□ 0.41
PRDM4-205ENST00000550376 OR2W1Q9Y3N9 320 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 ITPR1Q14643 2758 aa17.62■□□□□ 0.41
PRDM4-205ENST00000550376 TRBV6-6A0A0A6YYG2 114 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 ZNF250P15622 560 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 CD40P25942 277 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 ZCCHC24Q8N2G6 241 aaKnown RBP17.61■□□□□ 0.41
PRDM4-205ENST00000550376 CD177Q8N6Q3 437 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 CCDC71LQ8N9Z2 235 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 CNTNAP3BQ96NU0 1288 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 SUCNR1Q9BXA5 334 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 CNTNAP3Q9BZ76 1288 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 PCDHB10Q9UN67 800 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 PPP1R3CQ9UQK1 317 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 PIEZO1Q92508 2521 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 SNAPC5O75971 98 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 GLRXP35754 106 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 GLIPR1P48060 266 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 TESK1Q15569 626 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 ESCO2Q56NI9 601 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 H1FOOQ8IZA3 346 aaPredicted RBP17.61■□□□□ 0.41
PRDM4-205ENST00000550376 LGI3Q8N145 548 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 ARPC5LQ9BPX5 153 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 MEMO1Q9Y316 297 aa17.61■□□□□ 0.41
PRDM4-205ENST00000550376 NKX2-6A6NCS4 301 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 CTXN2P0C2S0 81 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 OR8U9P0C7N5 309 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 CEACAM6P40199 344 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 GABRA2P47869 451 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 OR3A1P47881 315 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 TGIF2LYQ8IUE0 185 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 OR8U1Q8NH10 309 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 RFESDQ8TAC1 157 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 MRGPRDQ8TDS7 321 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 COQ2Q96H96 371 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 TLNRD1Q9H1K6 362 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 RHOFQ9HBH0 211 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 RNF150Q9ULK6 438 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 TMA7Q9Y2S6 64 aaKnown RBP17.6■□□□□ 0.41
PRDM4-205ENST00000550376 RBM7Q9Y580 266 aaKnown RBP17.6■□□□□ 0.41
PRDM4-205ENST00000550376 C16orf97H3BN30 126 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.6■□□□□ 0.41
PRDM4-205ENST00000550376 PGLYRP1O75594 196 aaPredicted RBP17.6■□□□□ 0.41
PRDM4-205ENST00000550376 GLAP06280 429 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 TMPRSS3P57727 454 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms