RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SNRNP70P08621 437 aaKnown RBP8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM11P17152 192 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 FSTP19883 344 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 SERPINA2P20848 420 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 LOXL3P58215 753 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 SLC35A2P78381 396 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZNF816Q0VGE8 651 aaPredicted RBP8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 ST3GAL4Q11206 333 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM95Q3KNT9 176 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 SLC22A6Q4U2R8 563 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 C9orf152Q5JTZ5 239 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 ATAD3CQ5T2N8 411 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 STEAP3Q658P3 488 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 XAF1Q6GPH4 301 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 TRAT1Q6PIZ9 186 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 DRAM1Q8N682 238 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 PLPPR1Q8TBJ4 325 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 NEK7Q8TDX7 302 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GGHQ92820 318 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 MYDGFQ969H8 173 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 ARL11Q969Q4 196 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 RCC1LQ96I51 464 aaKnown RBP8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GON7Q9BXV9 100 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GPR61Q9BZJ8 451 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 GHRLQ9UBU3 117 aa8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 SIRT4Q9Y6E7 314 aaPredicted RBP8.66□□□□□ -1.02
VTI1BP3-201ENST00000550220 A0A1W2PPI3 338 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A10PA6NDY2 464 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A7PA6NKC0 464 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM90A23PA8MXZ1 464 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 AIPO00170 330 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 HSD17B6O14756 317 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 SPINT2O43291 252 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 TXNL1O43396 289 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 MT-ND4P03905 459 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 SSTR5P35346 364 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 GNG10P50151 68 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 SLC35B1P78383 322 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 DOC2BQ14184 412 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 EBI3Q14213 229 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 LTC4SQ16873 150 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 LRRC36Q1X8D7 754 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 C6orf183Q5T699 404 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZNF497Q6ZNH5 498 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 FOXRED2Q8IWF2 684 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 C8orf59Q8N0T1 100 aaPredicted RBP8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 JAGN1Q8N5M9 183 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 NKAIN3Q8N8D7 197 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR51D1Q8NGF3 324 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR56B4Q8NH76 319 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 VCXQ9H320 206 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZFP57Q9NU63 452 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 PLCXD1Q9NUJ7 323 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 CLEC2DQ9UHP7 191 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 ERGIC3Q9Y282 383 aa8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 MRPS28Q9Y2Q9 187 aaKnown RBP8.65□□□□□ -1.02
VTI1BP3-201ENST00000550220 PRKDCP78527 4128 aaKnown RBP8.65□□□□□ -1.03
VTI1BP3-201ENST00000550220 TRBV5-7A0A0A0MS05 114 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 SERPINE3A8MV23 424 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 C15orf65H3BRN8 121 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 SDCBPO00560 298 aaPredicted RBP8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 MYL12BO14950 172 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 PIN1P1O15428 100 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGKV1D-33P01593 117 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGKV1-33P01594 117 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 CD1BP29016 333 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 CAPGP40121 348 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 RPS11P62280 158 aaKnown RBP eCLIP8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 ADARB1P78563 741 aaKnown RBP8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 GLIPR1L1Q6UWM5 242 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 MOB3BQ86TA1 216 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF554Q86TJ5 538 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 TGIF2LXQ8IUE1 241 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 MS4A15Q8N5U1 240 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF485Q8NCK3 441 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR8H1Q8NGG4 311 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR2T10Q8NGZ9 312 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 MRAPQ8TCY5 172 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 LEAP2Q969E1 77 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 PGLYRP3Q96LB9 341 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 UQCC2Q9BRT2 126 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 GFOD1Q9NXC2 390 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 LRRC42Q9Y546 428 aa8.64□□□□□ -1.03
VTI1BP3-201ENST00000550220 PLXNB1O43157 2135 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGHV1-3A0A0C4DH29 117 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 LALBAP00709 142 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGHV3-7P01780 117 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGHG2P01859 326 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 CELP19835 753 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 FUT3P21217 361 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 WNT4P56705 351 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms