RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ALKBH6Q3KRA9 238 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 WDR86Q86TI4 376 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 SCCPDHQ8NBX0 429 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 OR52B4Q8NGK2 314 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 CYYR1Q96J86 154 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 RIMS4Q9H426 269 aaPredicted RBP16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF286AQ9HBT8 521 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 DECR2Q9NUI1 292 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 EHFQ9NZC4 300 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF581Q9P0T4 197 aa16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF230Q9UIE0 474 aaPredicted RBP16.7■□□□□ 0.26
CTDSP2-204ENST00000548823 F8VVB4 439 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 F8VWA3 439 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 M0R1B8 84 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 SNAPC5O75971 98 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 CRYAAP02489 173 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 PRKACAP17612 351 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 GLRXP35754 106 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 DVL1P1P54792 670 aaPredicted RBP16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 DHODHQ02127 395 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 RGS7BPQ6MZT1 257 aaPredicted RBP16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 TMED4Q7Z7H5 227 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 LYG2Q86SG7 212 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 C12orf45Q8N5I9 185 aaPredicted RBP16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 OR13G1Q8NGZ3 307 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 ZFAND1Q8TCF1 268 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 CAPSLQ8WWF8 208 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 HDHD3Q9BSH5 251 aaPredicted RBP16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 TLNRD1Q9H1K6 362 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF442Q9H7R0 627 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 NECAP2Q9NVZ3 263 aa16.69■□□□□ 0.26
CTDSP2-204ENST00000548823 TRBV6-6A0A0A6YYG2 114 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 PGA5P0DJD9 388 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF250P15622 560 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 HLA-GP17693 338 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 IL2RGP31785 369 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 ARPC4P59998 168 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF154Q13106 437 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 DHRS2Q13268 280 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 MIDNQ504T8 468 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 AWAT1Q58HT5 328 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 DHRS11Q6UWP2 260 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 NLRC3Q7RTR2 1065 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 MARCH1Q8TCQ1 289 aa16.68■□□□□ 0.26
CTDSP2-204ENST00000548823 IGKV1D-8A0A087WSZ0 117 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 FAM172BPA6NC97 362 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 MCRIP1C9JLW8 97 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 MLNRO43193 412 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 NAPSAO96009 420 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 GSTT2P0CG29 244 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 HILS1P60008 231 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 RPS23P62266 143 aaKnown RBP16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 RBM39Q14498 530 aaKnown RBP16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 TMEM128Q5BJH2 165 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 AADACL3Q5VUY0 350 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF660Q6AZW8 331 aaPredicted RBP16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 LPCAT3Q6P1A2 487 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 SHISA2Q6UWI4 295 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 NRIP2Q9BQI9 281 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF747Q9BV97 191 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 FN3KRPQ9HA64 309 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 PIPOXQ9P0Z9 390 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 PCDHB10Q9UN67 800 aa16.67■□□□□ 0.26
CTDSP2-204ENST00000548823 A0A0B4J2A0 478 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 C9orf170A2RU37 121 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 RGS11O94810 467 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 IGHV3-13P01766 116 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 SNRPD2P62316 118 aaKnown RBP16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 IKZF1Q13422 519 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 TREML4Q6UXN2 200 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 POC1AQ8NBT0 407 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 MITD1Q8WV92 249 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 MAFIPQ8WZ33 124 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 VRK1Q99986 396 aaPredicted RBP16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 HES4Q9HCC6 221 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 TREM2Q9NZC2 230 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 SHPKQ9UHJ6 478 aa16.66■□□□□ 0.26
CTDSP2-204ENST00000548823 RHBDL1O75783 438 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 DUS4LO95620 317 aaKnown RBP16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 OR5H8P0DN80 308 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 SRSF4Q08170 494 aaKnown RBP16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 ZNF146Q15072 292 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 SPIN3Q5JUX0 258 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 Q6P435 159 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 C5orf66Q9H5L9 145 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 CA10Q9NS85 328 aa16.65■□□□□ 0.26
CTDSP2-204ENST00000548823 H0YL77 283 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 SDCBPO00560 298 aaPredicted RBP16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 RGS13O14921 159 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 SLC22A5O76082 557 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 PTBP3O95758 552 aaKnown RBP16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 HLA-AP01891 365 aaKnown RBP16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 MDH2P40926 338 aaKnown RBP16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 PPP1R1AQ13522 171 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 Q6ZR03 302 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 JMJD8Q96S16 334 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 TMPRSS13Q9BYE2 586 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 Q9N2K0 584 aa16.64■□□□□ 0.26
CTDSP2-204ENST00000548823 PAIP2BQ9ULR5 123 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms