RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 Q96MT0 163 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 B9D2Q9BPU9 175 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 FAM53CQ9NYF3 392 aa16.05■□□□□ 0.16
SSH1-207ENST00000547862 GEMIN2O14893 280 aaKnown RBP16.04■□□□□ 0.16
SSH1-207ENST00000547862 CD2P06729 351 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 LUMP51884 338 aaPredicted RBP16.04■□□□□ 0.16
SSH1-207ENST00000547862 ZNF816Q0VGE8 651 aaPredicted RBP16.04■□□□□ 0.16
SSH1-207ENST00000547862 RAB40BQ12829 278 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 UNQ9370/PRO34162Q6UXP9 181 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 TMEM106AQ96A25 262 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 EAF1Q96JC9 268 aaPredicted RBP16.04■□□□□ 0.16
SSH1-207ENST00000547862 P2RX4Q99571 388 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 S100A13Q99584 98 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 METTL9Q9H1A3 318 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 NCOR1P1Q9H4R4 102 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 LINC00574Q9H8X3 128 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 ZFP57Q9NU63 452 aa16.04■□□□□ 0.16
SSH1-207ENST00000547862 GAPDHP04406 335 aaKnown RBP16.03■□□□□ 0.16
SSH1-207ENST00000547862 RPLP1P05386 114 aaKnown RBP16.03■□□□□ 0.16
SSH1-207ENST00000547862 GPR12P47775 334 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 ZNF529Q6P280 563 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 OR10A7Q8NGE5 316 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 OR13C5Q8NGS8 318 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 OR52N1Q8NH53 320 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 GPR148Q8TDV2 347 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 RAX2Q96IS3 184 aa16.03■□□□□ 0.16
SSH1-207ENST00000547862 A0A1W2PP11 408 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 H0YHG0 523 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 CCL24O00175 119 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 AP4M1O00189 453 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 MPZL2O60487 215 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 IL3RAP26951 378 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 ZNF93P35789 620 aaPredicted RBP16.02■□□□□ 0.16
SSH1-207ENST00000547862 DGCR2P98153 550 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 SLC22A6Q4U2R8 563 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 CXorf66Q5JRM2 361 aaPredicted RBP16.02■□□□□ 0.16
SSH1-207ENST00000547862 IZUMO1Q8IYV9 350 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 COMMD1Q8N668 190 aa16.02■□□□□ 0.16
SSH1-207ENST00000547862 RPL36Q9Y3U8 105 aaKnown RBP16.02■□□□□ 0.16
SSH1-207ENST00000547862 KMT2CQ8NEZ4 4911 aaKnown RBP16.01■□□□□ 0.15
SSH1-207ENST00000547862 AIPO00170 330 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 SLC31A2O15432 143 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 LIMS3P0CW19 117 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 LIMS4P0CW20 117 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 PAX5Q02548 391 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 SMN1Q16637 294 aaKnown RBP16.01■□□□□ 0.15
SSH1-207ENST00000547862 OR2G6Q5TZ20 316 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 ZFP1Q6P2D0 407 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 TEX38Q6PEX7 206 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 SLC16A12Q6ZSM3 486 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 TGIF2LXQ8IUE1 241 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 PRR18Q8N4B5 295 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 Q8N9W7 124 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 OR10V1Q8NGI7 309 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 OR2T10Q8NGZ9 312 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 RHOXF1Q8NHV9 184 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 APH1BQ8WW43 257 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 WWC2-AS2Q96NR7 200 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 PRR25Q96S07 402 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 C9orf16Q9BUW7 83 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 LIN7CQ9NUP9 197 aaKnown RBP16.01■□□□□ 0.15
SSH1-207ENST00000547862 GFOD1Q9NXC2 390 aa16.01■□□□□ 0.15
SSH1-207ENST00000547862 LOC100130705A0A1B0GUX0 176 aa16■□□□□ 0.15
SSH1-207ENST00000547862 ZNF736B4DX44 427 aaPredicted RBP16■□□□□ 0.15
SSH1-207ENST00000547862 C15orf65H3BRN8 121 aa16■□□□□ 0.15
SSH1-207ENST00000547862 BDKRB2P30411 391 aa16■□□□□ 0.15
SSH1-207ENST00000547862 SLC6A1P30531 599 aa16■□□□□ 0.15
SSH1-207ENST00000547862 ETV1P50549 477 aa16■□□□□ 0.15
SSH1-207ENST00000547862 GPR50Q13585 617 aa16■□□□□ 0.15
SSH1-207ENST00000547862 RTN4IP1Q8WWV3 396 aaPredicted RBP16■□□□□ 0.15
SSH1-207ENST00000547862 RASL11BQ9BPW5 248 aa16■□□□□ 0.15
SSH1-207ENST00000547862 ABCG5Q9H222 651 aa16■□□□□ 0.15
SSH1-207ENST00000547862 TMEM138Q9NPI0 162 aa16■□□□□ 0.15
SSH1-207ENST00000547862 IL36GQ9NZH8 169 aa16■□□□□ 0.15
SSH1-207ENST00000547862 MAGEA13PA6NCF6 341 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 DCTN2Q13561 401 aaKnown RBP15.99■□□□□ 0.15
SSH1-207ENST00000547862 PNLIPRP3Q17RR3 467 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 KLHL22Q53GT1 634 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 RPL22L1Q6P5R6 122 aaKnown RBP15.99■□□□□ 0.15
SSH1-207ENST00000547862 ASCL4Q6XD76 172 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 STX19Q8N4C7 294 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 Q8N6K4 173 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 Q8NFD4 153 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 ZNF184Q99676 751 aaPredicted RBP15.99■□□□□ 0.15
SSH1-207ENST00000547862 SLC29A1Q99808 456 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 HSPB9Q9BQS6 159 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 IFT22Q9H7X7 185 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 DCLRE1BQ9H816 532 aa15.99■□□□□ 0.15
SSH1-207ENST00000547862 RRP9O43818 475 aaKnown RBP15.98■□□□□ 0.15
SSH1-207ENST00000547862 MOSP00540 346 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 GZMHP20718 246 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 MYF6P23409 242 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 RIPK1Q13546 671 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 EBI3Q14213 229 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 MPV17LQ2QL34 196 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 NHLRC3Q5JS37 347 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 LINC00596Q86U02 117 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 ZFP41Q8N8Y5 198 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 OR5M8Q8NGP6 311 aa15.98■□□□□ 0.15
SSH1-207ENST00000547862 OR8U1Q8NH10 309 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms