RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 Q6ZTK2 550 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 LDLRAD3Q86YD5 345 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 PDZD9Q8IXQ8 264 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 ZDHHC22Q8N966 263 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 MRGPRDQ8TDS7 321 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 DYRK2Q92630 601 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 CLEC7AQ9BXN2 247 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 IDI2-AS1Q9NZ38 188 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 DAPK2Q9UIK4 370 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
DDX54-203ENST00000546869 MEIOCA2RUB1 952 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 C15orf65H3BRN8 121 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 RAB27BO00194 218 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 SCGNO76038 276 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 GABARAPO95166 117 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 NAPSAO96009 420 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 FBP1P09467 338 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 RPS19P39019 145 aaKnown RBP11.77□□□□□ -0.53
DDX54-203ENST00000546869 RPL5P46777 297 aaKnown RBP11.77□□□□□ -0.53
DDX54-203ENST00000546869 EFNB2P52799 333 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 LGALS4P56470 323 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 PRB3Q04118 309 aaPredicted RBP11.77□□□□□ -0.53
DDX54-203ENST00000546869 MXD1Q05195 221 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 PLA2G7Q13093 441 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 ARL6IP1Q15041 203 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 AANATQ16613 207 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 MINOS1Q5TGZ0 78 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 GPR141Q7Z602 305 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 OR10R2Q8NGX6 335 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.53
DDX54-203ENST00000546869 MALSU1Q96EH3 234 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 ABRACLQ9P1F3 81 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 ETV7Q9Y603 341 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 POMT1Q9Y6A1 747 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 MINOS1-NBL1R4GNA1 71 aa11.77□□□□□ -0.53
DDX54-203ENST00000546869 TRIM77I1YAP6 450 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 F2RL2O00254 374 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 OMGP23515 440 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 GDNFP39905 211 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 IER3P46695 156 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 BAMBIQ13145 260 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 CTF1Q16619 201 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 PLAC9Q5JTB6 97 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 PRAMEF5Q5TYX0 476 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 ZNF880Q6PDB4 577 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 C8orf31Q8N9H6 132 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 SLC25A46Q96AG3 418 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 CREB3L1Q96BA8 519 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 PECRQ9BY49 303 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
DDX54-203ENST00000546869 CUBNO60494 3623 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 A0A0B4J203 849 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 SMIM30A4D0T7 59 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 SPINT2O43291 252 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 ARG1P05089 322 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 MELTFP08582 738 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 COX7A1P24310 79 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 SSTR5P35346 364 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 TGFBR1P36897 503 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 PRRX1P54821 245 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 LOXL3P58215 753 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
DDX54-203ENST00000546869 DYNC1I2Q13409 638 aaKnown RBP11.75□□□□□ -0.53
DDX54-203ENST00000546869 SLC9A3R2Q15599 337 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 IDNKQ5T6J7 187 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 OR4K15Q8NH41 348 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 OR9G1Q8NH87 305 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 RFESDQ8TAC1 157 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 FAM216AQ8WUB2 273 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 CCDC107Q8WV48 283 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 TMEM158Q8WZ71 300 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 ARL11Q969Q4 196 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
DDX54-203ENST00000546869 RAB3CQ96E17 227 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 ARHGAP5-AS1Q96IT6 56 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 BCL7BQ9BQE9 202 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 DPAGT1Q9H3H5 408 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX54-203ENST00000546869 KCNIP1Q9NZI2 227 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 SPATA2Q9UM82 520 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 KCNK7Q9Y2U2 307 aa11.75□□□□□ -0.53
DDX54-203ENST00000546869 A0A0A6YYH2 397 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms