RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 CLEC18AA5D8T8 446 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 MANSC4A6NHS7 340 aaPredicted RBP9.03□□□□□ -0.96
SOD2-216ENST00000546260 M0R296 226 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 TLX3O43711 291 aaPredicted RBP9.03□□□□□ -0.96
SOD2-216ENST00000546260 LYPD3O95274 346 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 PFN1P07737 140 aaKnown RBP9.03□□□□□ -0.96
SOD2-216ENST00000546260 COX5AP20674 150 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 TMEM187Q14656 261 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 PLCXD3Q63HM9 321 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 MRPL54Q6P161 138 aaKnown RBP9.03□□□□□ -0.96
SOD2-216ENST00000546260 Q6ZWC4 215 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 CLEC18CQ8NCF0 446 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 MTIF3Q9H2K0 278 aaKnown RBP9.03□□□□□ -0.96
SOD2-216ENST00000546260 PIGLQ9Y2B2 252 aa9.03□□□□□ -0.96
SOD2-216ENST00000546260 GAGE12BA1L429 117 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 NKX2-2O95096 273 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 NDUFB4O95168 129 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 APODP05090 189 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 TMEM50BP56557 158 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 PLCXD2Q0VAA5 305 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 RNF208Q9H0X6 261 aa9.02□□□□□ -0.96
SOD2-216ENST00000546260 TMED7-TICAM2A0A0A6YYA0 188 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 A0A1W2PPV9 198 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 SIRPB1O00241 398 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 UTS2O95399 124 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 ZNF17P17021 662 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 TCN2P20062 427 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
SOD2-216ENST00000546260 GREB1Q4ZG55 1949 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 XIRP1Q702N8 1843 aaKnown RBP9.02□□□□□ -0.97
SOD2-216ENST00000546260 LRRC3BQ96PB8 259 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 CCL26Q9Y258 94 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 CD46P15529 392 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 FAM110CQ1W6H9 321 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 OR1K1Q8NGR3 316 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 IFI44Q8TCB0 444 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 C11orf40Q8WZ69 217 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 TMEM186Q96B77 213 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 HRASLS2Q9NWW9 162 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 QSER1Q2KHR3 1735 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 BRWD1Q9NSI6 2320 aa9.02□□□□□ -0.97
SOD2-216ENST00000546260 LILRA1O75019 489 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 RABIFP47224 123 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 KCNMB1Q16558 191 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 VN1R3Q9BXE9 311 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 MYO16Q9Y6X6 1858 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 TMEM14DPA8MWL7 114 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 MPPED1O15442 326 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 HYPMO75409 117 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 ZIC1Q15915 447 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 C9orf50Q5SZB4 431 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 DOK3Q7L591 496 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 C1orf174Q8IYL3 243 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SAXO1Q8IYX7 474 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SLC45A2Q9UMX9 530 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 FREM3P0C091 2139 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 IGKV1-8A0A0C4DH67 115 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 NUPR1O60356 82 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SLC35E2P0CK97 266 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 TSPOP30536 169 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 VIPR2P41587 438 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SLC38A11Q08AI6 406 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 PDLIM3Q53GG5 364 aaPredicted RBP9.01□□□□□ -0.97
SOD2-216ENST00000546260 KMT5CQ86Y97 462 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 RAB37Q96AX2 223 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 PLEKHA3Q9HB20 300 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SHISA7A6NL88 538 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 SH2D1BO14796 132 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 PRSS12P56730 875 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 LCN2P80188 198 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 TMEM171Q8WVE6 324 aa9.01□□□□□ -0.97
SOD2-216ENST00000546260 IGHV2OR16-5A0A0B4J2B6 119 aa9□□□□□ -0.97
SOD2-216ENST00000546260 LOC102725191A0A1B0GVB3 256 aa9□□□□□ -0.97
SOD2-216ENST00000546260 PGPEP1LA6NFU8 196 aa9□□□□□ -0.97
SOD2-216ENST00000546260 IGKV1D-16P01601 117 aa9□□□□□ -0.97
SOD2-216ENST00000546260 CDAP32320 146 aa9□□□□□ -0.97
SOD2-216ENST00000546260 PSG6Q00889 435 aa9□□□□□ -0.97
SOD2-216ENST00000546260 IZUMO4Q1ZYL8 232 aa9□□□□□ -0.97
SOD2-216ENST00000546260 LCN12Q6JVE5 192 aa9□□□□□ -0.97
SOD2-216ENST00000546260 WDFY1Q8IWB7 410 aa9□□□□□ -0.97
SOD2-216ENST00000546260 C16orf52Q8NHV5 167 aa9□□□□□ -0.97
SOD2-216ENST00000546260 DERL1Q9BUN8 251 aa9□□□□□ -0.97
SOD2-216ENST00000546260 AICDAQ9GZX7 198 aa9□□□□□ -0.97
SOD2-216ENST00000546260 MTCH1Q9NZJ7 389 aa9□□□□□ -0.97
SOD2-216ENST00000546260 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
SOD2-216ENST00000546260 LCTP09848 1927 aa9□□□□□ -0.97
SOD2-216ENST00000546260 C2orf72A6NCS6 295 aa9□□□□□ -0.97
SOD2-216ENST00000546260 OR2T8A6NH00 312 aa9□□□□□ -0.97
SOD2-216ENST00000546260 ZNF732B4DXR9 585 aa9□□□□□ -0.97
SOD2-216ENST00000546260 TMEM150CB9EJG8 249 aa9□□□□□ -0.97
SOD2-216ENST00000546260 IGFBP3P17936 291 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms