RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TRAT1Q6PIZ9 186 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 PRR18Q8N4B5 295 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 TPRX1Q8N7U7 411 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 ADAD2Q8NCV1 583 aaKnown RBP16.22■□□□□ 0.19
SKP2-208ENST00000546211 TMEM185AQ8NFB2 350 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 OR10J5Q8NHC4 309 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 ZNF431Q8TF32 576 aaPredicted RBP16.22■□□□□ 0.19
SKP2-208ENST00000546211 IL1F10Q8WWZ1 152 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 TOMM40LQ969M1 308 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 FAM234AQ9H0X4 552 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 C5orf66Q9H5L9 145 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 ZNF221Q9UK13 617 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 LAMP3Q9UQV4 416 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 EPG5Q9HCE0 2579 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 TRBV6-7A0A0A0MS04 114 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 FAM172BPA6NC97 362 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 SIGLEC5O15389 551 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 PPYP01298 95 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 AADACP22760 399 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 UBE2MP61081 183 aaKnown RBP16.21■□□□□ 0.19
SKP2-208ENST00000546211 FCN2Q15485 313 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 KCNJ8Q15842 424 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 NEU4Q8WWR8 484 aaPredicted RBP16.21■□□□□ 0.19
SKP2-208ENST00000546211 SPOCK3Q9BQ16 436 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 FXYD6Q9H0Q3 95 aa16.21■□□□□ 0.19
SKP2-208ENST00000546211 HLA-AP01891 365 aaKnown RBP16.21■□□□□ 0.18
SKP2-208ENST00000546211 CTSDP07339 412 aaPredicted RBP16.21■□□□□ 0.18
SKP2-208ENST00000546211 UCP3P55916 312 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 P2RX3P56373 397 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 EDDM3BP56851 147 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 CD300CQ08708 224 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 TMEM128Q5BJH2 165 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 MUC20Q8N307 709 aaPredicted RBP16.21■□□□□ 0.18
SKP2-208ENST00000546211 FAM216BQ8N7L0 139 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 MRGPRDQ8TDS7 321 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 LURAP1Q96LR2 239 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 RTBDNQ9BSG5 229 aaPredicted RBP16.21■□□□□ 0.18
SKP2-208ENST00000546211 DLL4Q9NR61 685 aa16.21■□□□□ 0.18
SKP2-208ENST00000546211 ROS1P08922 2347 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 ODAMA1E959 279 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 NPIPB11E5RHQ5 1161 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 TMPRSS2O15393 492 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 SELLP14151 372 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 PI3P19957 117 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 CD83Q01151 205 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 DHRS2Q13268 280 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 PPP1R1AQ13522 171 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 LYG2Q86SG7 212 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 OR13A1Q8NGR1 328 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 GALMQ96C23 342 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 NCOR1P1Q9H4R4 102 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 SLC23A1Q9UHI7 598 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 TANC2Q9HCD6 1990 aa16.2■□□□□ 0.18
SKP2-208ENST00000546211 ARFGEF3Q5TH69 2177 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 ZFYVE26Q68DK2 2539 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 A0A1B0GW55 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 A8MV72 311 aaPredicted RBP16.19■□□□□ 0.18
SKP2-208ENST00000546211 C12orf77C9JDV5 145 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 HSPA12AO43301 675 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 TUSC2O75896 110 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L2P0CJ85 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L3P0CJ86 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L4P0CJ87 422 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L5P0CJ88 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L6P0CJ89 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L7P0CJ90 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 VAMP1P23763 118 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 ZBTB25P24278 435 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 COL8A2P25067 703 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 ERP29P30040 261 aaKnown RBP16.19■□□□□ 0.18
SKP2-208ENST00000546211 IL2RGP31785 369 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 LPCAT3Q6P1A2 487 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4L9Q6RFH8 374 aaPredicted RBP16.19■□□□□ 0.18
SKP2-208ENST00000546211 SLC38A6Q8IZM9 456 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 ZNF565Q8N9K5 539 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 OR6C3Q9NZP0 311 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 DUX4Q9UBX2 424 aa16.19■□□□□ 0.18
SKP2-208ENST00000546211 C9orf170A2RU37 121 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 BOLA2-SMG1P6H3BVE0 249 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 NDUFA2O43678 99 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 SULT1A3P0DMM9 295 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 SULT1A4P0DMN0 295 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 GZMHP20718 246 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 DHODHQ02127 395 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 ABCA11PQ4W5N1 156 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 H1FOOQ8IZA3 346 aaPredicted RBP16.18■□□□□ 0.18
SKP2-208ENST00000546211 OR11H7Q8NGC8 314 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 UBALD1Q8TB05 177 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 TMEM230Q96A57 120 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 ST6GAL2Q96JF0 529 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 CLEC4MQ9H2X3 399 aaPredicted RBP16.18■□□□□ 0.18
SKP2-208ENST00000546211 OPN4Q9UHM6 478 aa16.18■□□□□ 0.18
SKP2-208ENST00000546211 SPTBN1Q01082 2364 aaKnown RBP16.18■□□□□ 0.18
SKP2-208ENST00000546211 LYNX1G3V0Z9 82 aa16.17■□□□□ 0.18
SKP2-208ENST00000546211 SPINT2O43291 252 aa16.17■□□□□ 0.18
SKP2-208ENST00000546211 ADAM20O43506 726 aa16.17■□□□□ 0.18
SKP2-208ENST00000546211 HBZP02008 142 aa16.17■□□□□ 0.18
SKP2-208ENST00000546211 LYNX1P0DP58 116 aa16.17■□□□□ 0.18
SKP2-208ENST00000546211 MRPS11P82912 194 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms