RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 UBE2KP61086 200 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 PCOLCEQ15113 449 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 VAX1Q5SQQ9 334 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 NSUN5P2Q63ZY6 315 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF826PQ6ZT77 177 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 GAPTQ8N292 157 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 LYZL4Q96KX0 146 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 MSL2Q9HCI7 577 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 DENND4AQ7Z401 1863 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-203ENST00000546084 IFNA10P01566 189 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 SULT1A1P50225 295 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 PCBD1P61457 104 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF154Q13106 437 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 SLC25A47Q6Q0C1 308 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 PP6455Q8WZ26 134 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF727A8MUV8 499 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 ZIC3O60481 467 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 YIF1AO95070 293 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 EIF2S3P41091 472 aaKnown RBP8.48□□□□□ -1.05
TRAF1-203ENST00000546084 SUMO3P55854 103 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-203ENST00000546084 HMGN3Q15651 99 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 POC1AQ8NBT0 407 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 OR10J5Q8NHC4 309 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 SIGLEC12Q96PQ1 595 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 PARP11Q9NR21 331 aa8.48□□□□□ -1.05
TRAF1-203ENST00000546084 LOC102724200A0A096LPH7 203 aaPredicted RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 TRBV6-7A0A0A0MS04 114 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 CEBPZOSA8MTT3 80 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 UMODP07911 640 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 FUT3P21217 361 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 CFPP27918 469 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 TAGLN2P37802 199 aaKnown RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 RAC3P60763 192 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 AARDQ4LEZ3 155 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 C1orf210Q8IVY1 113 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 OR1J1Q8NGS3 322 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 FAM122AQ96E09 287 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 GNG12Q9UBI6 72 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 CACFD1Q9UGQ2 172 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 IGHV1-45A0A0A0MS14 117 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 PINLYPA6NC86 204 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 SERPINE3A8MV23 424 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 TIMM8AO60220 97 aaPredicted RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 THBS4P35443 961 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 ENDOGQ14249 297 aaKnown RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 LRP11Q86VZ4 500 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 RPUSD4Q96CM3 377 aaKnown RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 C19orf12Q9NSK7 152 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 PRSS50Q9UI38 385 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF729A6NN14 1252 aaPredicted RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 FCGR3AP08637 254 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 COX6A1P12074 109 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 CHATP28329 748 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 ERVS71-1P61550 626 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 SLC10A1Q14973 349 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 RHEBQ15382 184 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 MARS2Q96GW9 593 aaKnown RBP8.47□□□□□ -1.05
TRAF1-203ENST00000546084 ABHD14AQ9BUJ0 271 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 SIRT7Q9NRC8 400 aa8.47□□□□□ -1.05
TRAF1-203ENST00000546084 SPAARA0A1B0GVQ0 90 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 E5RGE8 158 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 COX5BP10606 129 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 CST9LP1Q5W188 147 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 PMS2CLQ68D20 193 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 TBC1D26Q86UD7 250 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 DNASE2BQ8WZ79 361 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 GTF3AQ92664 365 aaKnown RBP8.46□□□□□ -1.05
TRAF1-203ENST00000546084 OR2H1Q9GZK4 316 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 CHST5Q9GZS9 411 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 TUBG2Q9NRH3 451 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 DEPPQ9NTK1 212 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 TCF21O43680 179 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 SRSF10O75494 262 aaKnown RBP8.46□□□□□ -1.05
TRAF1-203ENST00000546084 HEXAP06865 529 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 PRF1P14222 555 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF133P52736 654 aaPredicted RBP8.46□□□□□ -1.05
TRAF1-203ENST00000546084 UBE2G2P60604 165 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 QRFPP83859 136 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 BTNL8Q6UX41 500 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 HIST2H3AQ71DI3 136 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 Q8NFD4 153 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 HS3ST6Q96QI5 342 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 GPR35Q9HC97 309 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 GPR27Q9NS67 375 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 TMEM38BQ9NVV0 291 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 LIPGQ9Y5X9 500 aa8.46□□□□□ -1.05
TRAF1-203ENST00000546084 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
TRAF1-203ENST00000546084 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 AP4M1O00189 453 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 CHST1O43916 411 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 PPP1CCP36873 323 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms