RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	OR52N1	Q8NH53	320 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	APH1B	Q8WW43	257 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	DUX3	Q96PT4	197 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	SLC29A1	Q99808	456 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	C9orf16	Q9BUW7	83 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	METTL9	Q9H1A3	318 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	IFT22	Q9H7X7	185 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	MRPS18A	Q9NVS2	196 aa	Known RBP	18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	IL36G	Q9NZH8	169 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	LOC100130705	A0A1B0GUX0	176 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	LINC01548	A6NM66	108 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	NCBP2L	A6PVI3	153 aa	Known RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	SDCBP	O00560	298 aa	Predicted RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	GEMIN2	O14893	280 aa	Known RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	GAPDH	P04406	335 aa	Known RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	SLC6A1	P30531	599 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	ZNF93	P35789	620 aa	Predicted RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	MYCNOS	P40205	109 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	KLHL22	Q53GT1	634 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	NHLRC3	Q5JS37	347 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	RPL22L1	Q6P5R6	122 aa	Known RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	ZNF695	Q8IW36	515 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	COMMD1	Q8N668	190 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	CCDC107	Q8WV48	283 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	ARL11	Q969Q4	196 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	EAF1	Q96JC9	268 aa	Predicted RBP	18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	P2RX4	Q99571	388 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	TMEM138	Q9NPI0	162 aa		18.73	■□□□□ 0.59
RAP1B-233	ENST00000545720	DNAH9	Q9NYC9	4486 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	C15orf65	H3BRN8	121 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	GZMH	P20718	246 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	EBI3	Q14213	229 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	ATAD3C	Q5T2N8	411 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	FAM53A	Q6NSI3	398 aa	Predicted RBP	18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	IZUMO1	Q8IYV9	350 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	NEK7	Q8TDX7	302 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	ORAI1	Q96D31	301 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	S100A13	Q99584	98 aa		18.72	■□□□□ 0.59
RAP1B-233	ENST00000545720	TENM3	Q9P273	2699 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	IGHV3-43	A0A0B4J1X8	118 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	AP4M1	O00189	453 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	IGHV3-43D	P0DP04	118 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	GPR12	P47775	334 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	ETV1	P50549	477 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	RAB25	P57735	213 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	SMN1	Q16637	294 aa	Known RBP	18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	CCDC58	Q4VC31	144 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	OR2G6	Q5TZ20	316 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	LINC00596	Q86U02	117 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	TGIF2LX	Q8IUE1	241 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720		Q8N6K4	173 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	B9D2	Q9BPU9	175 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	FGF20	Q9NP95	211 aa	Predicted RBP	18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720	GFOD1	Q9NXC2	390 aa		18.71	■□□□□ 0.59
RAP1B-233	ENST00000545720		A0A1W2PP11	408 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	BDKRB2	P30411	391 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	MPV17L	Q2QL34	196 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	SLC22A6	Q4U2R8	563 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	TEX38	Q6PEX7	206 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	OR52M1	Q8NGK5	317 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	OR13C5	Q8NGS8	318 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	OR2T10	Q8NGZ9	312 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	RAX2	Q96IS3	184 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	ABCG5	Q9H222	651 aa		18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	LIN7C	Q9NUP9	197 aa	Known RBP	18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	SIRT4	Q9Y6E7	314 aa	Predicted RBP	18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	KMT2C	Q8NEZ4	4911 aa	Known RBP	18.7	■□□□□ 0.58
RAP1B-233	ENST00000545720	RPLP1	P05386	114 aa	Known RBP	18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	IL3RA	P26951	378 aa		18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	UNQ9370/PRO34162	Q6UXP9	181 aa		18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	LCNL1	Q6ZST4	164 aa		18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	LINC00311	Q8N616	119 aa		18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720		Q8N9W7	124 aa		18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720	ZNF184	Q99676	751 aa	Predicted RBP	18.69	■□□□□ 0.58
RAP1B-233	ENST00000545720		H0YHG0	523 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	AIP	O00170	330 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	CCL24	O00175	119 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	ORC5	O43913	435 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	WBP4	O75554	376 aa	Known RBP	18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	RIPK1	Q13546	671 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	DEFB136	Q30KP8	78 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	TMPRSS11A	Q6ZMR5	421 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	ZNF497	Q6ZNH5	498 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	TMEM104	Q8NE00	496 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	ST6GALNAC6	Q969X2	333 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	SMIM19	Q96E16	107 aa		18.68	■□□□□ 0.58
RAP1B-233	ENST00000545720	MAGEA13P	A6NCF6	341 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	SLC31A2	O15432	143 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	GTF2F2	P13984	249 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	DGCR2	P98153	550 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	DCTN2	Q13561	401 aa	Known RBP	18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	PNLIPRP3	Q17RR3	467 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	CXorf66	Q5JRM2	361 aa	Predicted RBP	18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	STX19	Q8N4C7	294 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	C8orf31	Q8N9H6	132 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	TFAP2C	Q92754	450 aa		18.67	■□□□□ 0.58
RAP1B-233	ENST00000545720	RBMXL1	Q96E39	390 aa	Known RBP	18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms