RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 OR51T1Q8NGJ9 327 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 OR5D14Q8NGL3 314 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 OR9G1Q8NH87 305 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 RFESDQ8TAC1 157 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 PLPPR1Q8TBJ4 325 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 RPEQ96AT9 228 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 CREB3L1Q96BA8 519 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 PDCD1LG2Q9BQ51 273 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 ALG8Q9BVK2 526 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 JAM3Q9BX67 310 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 AMBNQ9NP70 447 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 PALMDQ9NP74 551 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 CALYQ9NYX4 217 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 IDI2-AS1Q9NZ38 188 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 RSL24D1Q9UHA3 163 aaKnown RBP6.71□□□□□ -1.34
USP28-215ENST00000545608 KIF25Q9UIL4 384 aa6.71□□□□□ -1.34
USP28-215ENST00000545608 TRAV39A0A0B4J263 110 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 A0A1W2PPI3 338 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 PSMB11A5LHX3 300 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 NPIPB11E5RHQ5 1161 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 J3QR06 171 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 M0QZK8 103 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 GABRPO00591 440 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
USP28-215ENST00000545608 GLP1RP43220 463 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ALDH3A2P51648 485 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 HNF4GQ14541 408 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 LTC4SQ16873 150 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
USP28-215ENST00000545608 DEFB121Q5J5C9 76 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 OGFRL1Q5TC84 451 aaPredicted RBP6.7□□□□□ -1.34
USP28-215ENST00000545608 RSBN1Q5VWQ0 802 aaPredicted RBP6.7□□□□□ -1.34
USP28-215ENST00000545608 LPCAT4Q643R3 524 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 CCDC144NLQ6NUI1 221 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ETV3LQ6ZN32 361 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 C18orf65Q6ZTR6 163 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 SYS1Q8N2H4 156 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 DRAM1Q8N682 238 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 LINC00482Q8N8I6 264 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ZNF565Q8N9K5 539 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 PXT1Q8NFP0 134 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 OR51A2Q8NGJ7 313 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 OR10K1Q8NGX5 313 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 OR56B4Q8NH76 319 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 OR5AK2Q8NH90 309 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 CNIH3Q8TBE1 160 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 MRGPRDQ8TDS7 321 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 TOMM40LQ969M1 308 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 NOL4LQ96MY1 436 aaPredicted RBP6.7□□□□□ -1.34
USP28-215ENST00000545608 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 NCOR1P1Q9H4R4 102 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 LINC00574Q9H8X3 128 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 PSG11Q9UQ72 335 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 MOB4Q9Y3A3 225 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 ORC6Q9Y5N6 252 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 HSPE1-MOB4S4R3N1 261 aa6.7□□□□□ -1.34
USP28-215ENST00000545608 A0A1W2PPE3 182 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 TMEM212A6NML5 194 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 SNTNA6NMZ2 147 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 DUS4LO95620 317 aaKnown RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 IL1AP01583 271 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 RAB3AP20336 220 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 S100A1P23297 94 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 C21orf33P30042 268 aaPredicted RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 SOX2P48431 317 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 GNG10P50151 68 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 RPL23AP62750 156 aaKnown RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 EGFEM1PQ0D2K5 195 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 DOC2BQ14184 412 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 HES1Q14469 280 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 IL13RA2Q14627 380 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 PIGYQ3MUY2 71 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 VAX1Q5SQQ9 334 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 C11orf87Q6NUJ2 197 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 ZNF529Q6P280 563 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 ASCL4Q6XD76 172 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 Q8N1Y9 231 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 CBR4Q8N4T8 237 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 C5orf56Q8N8D9 126 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 Q8NFD4 153 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 OR52I1Q8NGK6 324 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 RHOXF1Q8NHV9 184 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 TNFAIP8L1Q8WVP5 186 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 TSEN15Q8WW01 171 aaKnown RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 RGP1Q92546 391 aaPredicted RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 BORCS5Q969J3 196 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 MRPL48Q96GC5 212 aaKnown RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 GPER1Q99527 375 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 SLC29A1Q99808 456 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 BARHL1Q9BZE3 327 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 PCDHB16Q9NRJ7 776 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 LINC00527Q9UJ94 153 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 AMMECR1Q9Y4X0 333 aaPredicted RBP6.69□□□□□ -1.34
USP28-215ENST00000545608 GMPPBQ9Y5P6 360 aa6.69□□□□□ -1.34
USP28-215ENST00000545608 X6R8D5 127 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms