RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 GLAP06280 429 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 FUT3P21217 361 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 HTR2CP28335 458 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 BRS3P32247 399 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 HLA-DRB5Q30154 266 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 ZNF497Q6ZNH5 498 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 TMEM91Q6ZNR0 172 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 SVOPQ8N4V2 548 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 OR6M1Q8NGM8 313 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 KCNG3Q8TAE7 436 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 Q96M66 194 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 RANBP3Q9H6Z4 567 aaPredicted RBP12.69□□□□□ -0.38
CCDC78-216ENST00000544996 RAB9BQ9NP90 201 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 ETAA1Q9NY74 926 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
CCDC78-216ENST00000544996 ANK2Q01484 3957 aa12.69□□□□□ -0.38
CCDC78-216ENST00000544996 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 CA11O75493 328 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 MPIG6BO95866 241 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 MT-ND4P03905 459 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
CCDC78-216ENST00000544996 SSTR5P35346 364 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 RANBP1P43487 201 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 EMX1Q04741 257 aaPredicted RBP12.68□□□□□ -0.38
CCDC78-216ENST00000544996 LTC4SQ16873 150 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 SLC16A12Q6ZSM3 486 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 YTHDF1Q9BYJ9 559 aaKnown RBP12.68□□□□□ -0.38
CCDC78-216ENST00000544996 MMP28Q9H239 520 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 FBLN5Q9UBX5 448 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 RRP15Q9Y3B9 282 aaKnown RBP12.68□□□□□ -0.38
CCDC78-216ENST00000544996 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
CCDC78-216ENST00000544996 A6NDX4 124 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 J3QR06 171 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 SLC22A1O15245 554 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 ORC5O43913 435 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 CHST1O43916 411 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 PDCD6O75340 191 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 BPNT1O95861 308 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 VSIG8P0DPA2 414 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 CD37P11049 281 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 MNDAP41218 407 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 KIR2DS4P43632 304 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 PSMD7P51665 324 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 PROK1P58294 105 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 FABP5Q01469 135 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 C6orf183Q5T699 404 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 TMEM59Q9BXS4 323 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 PSG11Q9UQ72 335 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 FBN3Q75N90 2809 aa12.67□□□□□ -0.38
CCDC78-216ENST00000544996 SPINT2O43291 252 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 IGHV3-7P01780 117 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 RPS27AP62979 156 aaKnown RBP12.66□□□□□ -0.38
CCDC78-216ENST00000544996 NKAPLQ5M9Q1 402 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 SYT6Q5T7P8 510 aaPredicted RBP12.66□□□□□ -0.38
CCDC78-216ENST00000544996 OR10K2Q6IF99 312 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 C11orf88Q6PI97 169 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 OR52M1Q8NGK5 317 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 OR10X1Q8NGY0 326 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 RPEQ96AT9 228 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
CCDC78-216ENST00000544996 LRRC42Q9Y546 428 aa12.66□□□□□ -0.38
CCDC78-216ENST00000544996 UBE2QL1A1L167 161 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 SDCBPO00560 298 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-216ENST00000544996 SLC17A2O00624 439 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 ARSBP15848 533 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 JUNBP17275 347 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-216ENST00000544996 GNG10P50151 68 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 MADCAM1Q13477 382 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 RAB11BQ15907 218 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 SSX1Q16384 188 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 PRR31Q5SQ13 230 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 UTF1Q5T230 341 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 SIGIRRQ6IA17 410 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-216ENST00000544996 SPARTQ8N0X7 666 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 GAPTQ8N292 157 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 OR4K15Q8NH41 348 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 CAPSLQ8WWF8 208 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 FCGR1BQ92637 280 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 LEAP2Q969E1 77 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 CITED1Q99966 193 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
CCDC78-216ENST00000544996 LY6LH3BQJ8 138 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms