RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CCSO14618 274 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 SIAH2O43255 324 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 IFNA2P01563 188 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 PAX5Q02548 391 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 AESQ08117 197 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 ABCA11PQ4W5N1 156 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 H1FOOQ8IZA3 346 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-218ENST00000543939 KIRREL1Q96J84 757 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 KIF25Q9UIL4 384 aa16.62■□□□□ 0.25
COPS7A-218ENST00000543939 DSCAMO60469 2012 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 PLAUP00749 431 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 ASCC1Q8N9N2 400 aaKnown RBP16.61■□□□□ 0.25
COPS7A-218ENST00000543939 OR11L1Q8NGX0 322 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 OR10J5Q8NHC4 309 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 GRPEL2Q8TAA5 225 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 SLC2A9Q9NRM0 540 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 PRR13Q9NZ81 148 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 RNF115Q9Y4L5 304 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 ROS1P08922 2347 aa16.61■□□□□ 0.25
COPS7A-218ENST00000543939 TEX13DA0A0J9YY54 714 aaPredicted RBP16.6■□□□□ 0.25
COPS7A-218ENST00000543939 TNFRSF1AP19438 455 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 APOBEC3AP31941 199 aaPredicted RBP16.6■□□□□ 0.25
COPS7A-218ENST00000543939 CD80P33681 288 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 CCL8P80075 99 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 TESK1Q15569 626 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 EFNB3Q15768 340 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 C4orf17Q53FE4 359 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 PHLDA2Q53GA4 152 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 FAM209AQ5JX71 171 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 FAM201AQ5SY85 155 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 GALNT11Q8NCW6 608 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 ANGPTL6Q8NI99 470 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
COPS7A-218ENST00000543939 NAA60Q9H7X0 242 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 TAF9BQ9HBM6 251 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 PPP1R3CQ9UQK1 317 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 HSPB11Q9Y547 144 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 HIVEP3Q5T1R4 2406 aa16.6■□□□□ 0.25
COPS7A-218ENST00000543939 IGKV1D-13A0A0B4J2D9 117 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 CD8AP01732 235 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 IGKV1-13P0DP09 117 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 GNLYP22749 145 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 GNRHRP30968 328 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 UQCRFS1P47985 274 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 MST1LQ2TV78 715 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 KRBOX4Q5JUW0 171 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 ZCCHC24Q8N2G6 241 aaKnown RBP16.59■□□□□ 0.25
COPS7A-218ENST00000543939 GALNT14Q96FL9 552 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 SNX22Q96L94 193 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 TMEM246Q9BRR3 403 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 RAB18Q9NP72 206 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 CYB5R3P00387 301 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-218ENST00000543939 LOXP28300 417 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-218ENST00000543939 GABRA2P47869 451 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 ADGRG4Q8IZF6 3080 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 CCDC71LQ8N9Z2 235 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 LILRB1Q8NHL6 650 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-218ENST00000543939 SECTM1Q8WVN6 248 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 IL1F10Q8WWZ1 152 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 KCNIP1Q9NZI2 227 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 OR1A1Q9P1Q5 309 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 OR2W1Q9Y3N9 320 aa16.59■□□□□ 0.25
COPS7A-218ENST00000543939 ACACBO00763 2458 aa16.58■□□□□ 0.25
COPS7A-218ENST00000543939 ARFGEF3Q5TH69 2177 aa16.58■□□□□ 0.25
COPS7A-218ENST00000543939 RAI1Q7Z5J4 1906 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-218ENST00000543939 OOEPA6NGQ2 149 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 DEFB108AA8MXU0 73 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 GLIPR1P48060 266 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 SNRPD2P62316 118 aaKnown RBP16.58■□□□□ 0.24
COPS7A-218ENST00000543939 LGALSLQ3ZCW2 172 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-218ENST00000543939 TGIF2LYQ8IUE0 185 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF565Q8N9K5 539 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 PPP1R35Q8TAP8 253 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 SEC22AQ96IW7 307 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 PDCD10Q9BUL8 212 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 EGLN1Q9GZT9 426 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 KCNIP3Q9Y2W7 256 aa16.58■□□□□ 0.24
COPS7A-218ENST00000543939 FAM25EA8MYX2 175 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 B9A039 149 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 C12orf77C9JDV5 145 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 IRF2P14316 349 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 RND3P61587 244 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 STUMQ69YW2 141 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 GSG1LQ6UXU4 331 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 LDLRAD3Q86YD5 345 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 FAM185AQ8N0U4 392 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 PRR18Q8N4B5 295 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 TMEM204Q9BSN7 226 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 CISD1Q9NZ45 108 aaKnown RBP16.57■□□□□ 0.24
COPS7A-218ENST00000543939 TANC2Q9HCD6 1990 aa16.57■□□□□ 0.24
COPS7A-218ENST00000543939 K7N7A8 449 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 GPR31O00270 319 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 MGST3O14880 152 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 ADAP1O75689 374 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 HEXAP06865 529 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 TMEM187Q14656 261 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 TEX36Q5VZQ5 186 aa16.56■□□□□ 0.24
COPS7A-218ENST00000543939 ZNF808Q8N4W9 903 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-218ENST00000543939 UBALD1Q8TB05 177 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms