RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TMEM133Q9H2Q1 129 aa12.3□□□□□ -0.44
CD9-210ENST00000543916 LINC00574Q9H8X3 128 aa12.3□□□□□ -0.44
CD9-210ENST00000543916 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
CD9-210ENST00000543916 FAM172BPA6NC97 362 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 C15orf65H3BRN8 121 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 CA11O75493 328 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
CD9-210ENST00000543916 OLFML2AQ68BL7 652 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 Q6ZPA2 131 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 RFESDQ8TAC1 157 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 ZNF418Q8TF45 676 aaPredicted RBP12.29□□□□□ -0.44
CD9-210ENST00000543916 KIRREL1Q96J84 757 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
CD9-210ENST00000543916 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 ODF3BA8MYP8 253 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 NPIPB11E5RHQ5 1161 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 RAB27BO00194 218 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 TCF21O43680 179 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 VENTXO95231 258 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
CD9-210ENST00000543916 MIDNQ504T8 468 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 Q6ZTK2 550 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 CLVS1Q8IUQ0 354 aaPredicted RBP12.28□□□□□ -0.44
CD9-210ENST00000543916 OR11H6Q8NGC7 330 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 OR10R2Q8NGX6 335 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 C17orf50Q8WW18 174 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 SLC25A38Q96DW6 304 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 AJUBAQ96IF1 538 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
CD9-210ENST00000543916 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 ZNF286AQ9HBT8 521 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 MBNL3Q9NUK0 354 aaKnown RBP12.28□□□□□ -0.44
CD9-210ENST00000543916 IDI2-AS1Q9NZ38 188 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
CD9-210ENST00000543916 METTL21EPA6NDL7 271 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 C12orf77C9JDV5 145 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 ORC5O43913 435 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 NAPSAO96009 420 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 GZMHP20718 246 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 NFYBP25208 207 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 SCAND1P57086 179 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 HILS1P60008 231 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 LTC4SQ16873 150 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 LDLRAD2Q5SZI1 272 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 C5orf24Q7Z6I8 188 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 CROCCP3Q8IVE0 287 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 ARL11Q969Q4 196 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 RAB3CQ96E17 227 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 CLEC7AQ9BXN2 247 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 KCNK7Q9Y2U2 307 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 ETV7Q9Y603 341 aa12.27□□□□□ -0.45
CD9-210ENST00000543916 C2CD3Q4AC94 2353 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 A0A087X0M5 115 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 A0A0A6YYJ9 748 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 A0A1B0GX30 115 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 MFNGO00587 321 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 TMEM127O75204 238 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 ARG1P05089 322 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 HIST1H1DP16402 221 aaKnown RBP12.26□□□□□ -0.45
CD9-210ENST00000543916 GNB3P16520 340 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 PAX6P26367 422 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 CD34P28906 385 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
CD9-210ENST00000543916 FAM189A2Q15884 450 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 C6orf183Q5T699 404 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 FAM53AQ6NSI3 398 aaPredicted RBP12.26□□□□□ -0.45
CD9-210ENST00000543916 ZNF880Q6PDB4 577 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 LHFPL4Q7Z7J7 247 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 ABHD12Q8N2K0 398 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 OR1L1Q8NH94 360 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 DCSTAMPQ9H295 470 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 ZMAT3Q9HA38 289 aaKnown RBP12.26□□□□□ -0.45
CD9-210ENST00000543916 CHMP1AQ9HD42 196 aaPredicted RBP12.26□□□□□ -0.45
CD9-210ENST00000543916 ABRACLQ9P1F3 81 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
CD9-210ENST00000543916 A0A075B6Q4 140 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 DNAJC9-AS1A6NH13 148 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 IGHV3-7P01780 117 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 HBZP02008 142 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 MELTFP08582 738 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 BAMBIQ13145 260 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 SPCS2Q15005 226 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 TRAT1Q6PIZ9 186 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 RBMS3Q6XE24 437 aaKnown RBP12.25□□□□□ -0.45
CD9-210ENST00000543916 Q6YL49 198 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms