RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ALKBH6Q3KRA9 238 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 Q8IYB0 196 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 OR1J1Q8NGS3 322 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ARV1Q9H2C2 271 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 POLDIP2Q9Y2S7 368 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ATG12O94817 140 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 CNOT4O95628 575 aaKnown RBP11.81□□□□□ -0.52
MSH2-206ENST00000543555 UCP1P25874 307 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
MSH2-206ENST00000543555 UCP2P55851 309 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 RTP5Q14D33 572 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ZNF324BQ6AW86 544 aaPredicted RBP11.81□□□□□ -0.52
MSH2-206ENST00000543555 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
MSH2-206ENST00000543555 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ACACBO00763 2458 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 IQCF6A8MYZ5 107 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 VWA1Q6PCB0 445 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 C9orf106Q8NAJ2 232 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 SPIN2AQ99865 258 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 SPIN2BQ9BPZ2 258 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 COX5AP20674 150 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 BLOC1S1P78537 153 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 PSG7Q13046 419 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 ZNF154Q13106 437 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 GNMTQ14749 295 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 IGF2-ASQ6U949 168 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 H1FOOQ8IZA3 346 aaPredicted RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 OR10J5Q8NHC4 309 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 SARAFQ96BY9 339 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 KIRREL1Q96J84 757 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 OR2W1Q9Y3N9 320 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 TLN1Q9Y490 2541 aaKnown RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 NUPL2O15504 423 aaKnown RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 PGA5P0DJD9 388 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 CBR1P16152 277 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 NKX6-2Q9C056 277 aaPredicted RBP11.8□□□□□ -0.52
MSH2-206ENST00000543555 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 CACNA1AO00555 2505 aa11.8□□□□□ -0.52
MSH2-206ENST00000543555 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 H0Y980 276 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 DNASE2O00115 360 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 SIRPB1O00241 398 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 SLC33A1O00400 549 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 CDIPTO14735 213 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 OR2H2O95918 312 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 SELEP16581 610 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 NKX2-1P43699 371 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 WNT2BQ93097 391 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 TMEM231Q9H6L2 316 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 WASF3Q9UPY6 502 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 ARID1AO14497 2285 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 CLEC18AA5D8T8 446 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 ADAM20O43506 726 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 TNFSF12O43508 249 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 IGKV3-15P01624 115 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 HOXC12P31275 282 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 CAV2P51636 162 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 NHLH2Q02577 135 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 NMSQ5H8A3 153 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 MOB1BQ7L9L4 216 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 WDR31Q8NA23 367 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 CLEC18CQ8NCF0 446 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 C1orf162Q8NEQ5 155 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 OR5D13Q8NGL4 314 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 PLPPR1Q8TBJ4 325 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 KLF14Q8TD94 323 aaPredicted RBP11.79□□□□□ -0.52
MSH2-206ENST00000543555 BOD1Q96IK1 185 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
MSH2-206ENST00000543555 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 VDAC1P21796 283 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 MPV17P39210 176 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 ID4P47928 161 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 OR8G1Q15617 311 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 KALRNO60229 2985 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 F8W036 122 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 AGFG2O95081 481 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 NXPH2O95156 264 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
MSH2-206ENST00000543555 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSH2-206ENST00000543555 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSH2-206ENST00000543555 ZNF146Q15072 292 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms