RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 MOSP00540 346 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 OR8U8P0C7N1 319 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 CD1BP29016 333 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 SOX6P35712 828 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 GNB1P62873 340 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 RUNX1Q01196 453 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 TMED1Q13445 227 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 PIGYQ3MUY2 71 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF691Q5VV52 312 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 OR1N2Q8NGR9 330 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 RNFT2Q96EX2 444 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 UBE2E2Q96LR5 201 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 GABARAPL1Q9H0R8 117 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 ISYNA1Q9NPH2 558 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 POMPQ9Y244 141 aa13.83□□□□□ -0.2
CLSTN3-214ENST00000542663 C15orf65H3BRN8 121 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 J3QRE1 110 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 SULT1B1O43704 296 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 HTR1AP08908 422 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 SPNP16150 400 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 PPIFP30405 207 aaKnown RBP13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 KCNJ3P48549 501 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF616Q08AN1 781 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 IL13RA2Q14627 380 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 FAM27D1Q5T7N8 215 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 KCTD20Q7Z5Y7 419 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 C8orf31Q8N9H6 132 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 PXT1Q8NFP0 134 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 OR8J1Q8NGP2 316 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 UBALD1Q8TB05 177 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 DCUN1D4Q92564 292 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 CIB1Q99828 191 aa13.82□□□□□ -0.2
CLSTN3-214ENST00000542663 GABRPO00591 440 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 SLC16A6O15403 523 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 LPCAT4Q643R3 524 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 SUMF2Q8NBJ7 301 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 OR8H1Q8NGG4 311 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 OR10K1Q8NGX5 313 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 OR5B12Q96R08 314 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 ZMAT4Q9H898 229 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 FAM118AQ9NWS6 357 aa13.81□□□□□ -0.2
CLSTN3-214ENST00000542663 IGHV3-43A0A0B4J1X8 118 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 TRIM64CA6NLI5 447 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 SLC31A2O15432 143 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 IGLV1-40P01703 118 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 IGHV3-43DP0DP04 118 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 VHLP40337 213 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 ALKBH1Q13686 389 aaKnown RBP13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 ATP6AP1Q15904 470 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 SERPINA12Q8IW75 414 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 PARP16Q8N5Y8 322 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 RFKQ969G6 155 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 TM2D3Q9BRN9 247 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 DPCDQ9BVM2 203 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 EDA2RQ9HAV5 297 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 GFOD1Q9NXC2 390 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 ENOPH1Q9UHY7 261 aa13.8□□□□□ -0.2
CLSTN3-214ENST00000542663 DAPL1A0PJW8 107 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 G3V318 75 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 DYNC1I1O14576 645 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 OVOL1O14753 267 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 SAP30O75446 220 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 OR5H8P0DN80 308 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 SLC2A2P11168 524 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 GP9P14770 177 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 GZMHP20718 246 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 ADAMTSL5Q6ZMM2 481 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF439Q8NDP4 499 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 OR5D14Q8NGL3 314 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 ARL11Q969Q4 196 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 GABARAPL3Q9BY60 117 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF107Q9UII5 783 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 WSB1Q9Y6I7 421 aa13.79□□□□□ -0.2
CLSTN3-214ENST00000542663 J3QLW9 94 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF19P17023 458 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 MYF6P23409 242 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF134P52741 427 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF137PP52743 207 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ZNF529Q6P280 563 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 OR51A2Q8NGJ7 313 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 C4orf36Q96KX1 117 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 CHCHD6Q9BRQ6 235 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 ALX4Q9H161 411 aaPredicted RBP13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 IFT22Q9H7X7 185 aa13.78□□□□□ -0.2
CLSTN3-214ENST00000542663 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 ATP6V0E1O15342 81 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 HTR3BO95264 441 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 IL3RAP26951 378 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 SLURP1P55000 103 aa13.77□□□□□ -0.21
CLSTN3-214ENST00000542663 RSU1Q15404 277 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms