RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 FSTP19883 344 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 RPS11P62280 158 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDB1-220ENST00000542337 GLIPR1L1Q6UWM5 242 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 REC114Q7Z4M0 266 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 OR52M1Q8NGK5 317 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 CCDC107Q8WV48 283 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 MUL1Q969V5 352 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 PGLYRP3Q96LB9 341 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 OR14A2Q96R54 314 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 PSORS1C1Q9UIG5 152 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 ERGIC3Q9Y282 383 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 TGP01266 2768 aa16.13■□□□□ 0.17
DDB1-220ENST00000542337 TRAV8-7A0A075B6U6 113 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 TRBV5-7A0A0A0MS05 114 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A18PA6NE21 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A16PA6NEW6 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A20PA6NIJ5 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A9PA6NNJ1 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 ADARB2-AS1A8MUL3 147 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A12PA8MX19 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A5PA8MXJ8 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 AIPO00170 330 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 SDCBPO00560 298 aaPredicted RBP16.12■□□□□ 0.17
DDB1-220ENST00000542337 ORC5O43913 435 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 GAPDHP04406 335 aaKnown RBP16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A15PP0C7V4 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A13PP0C7W8 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A14PP0C7W9 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 FAM90A24PP0C7X0 464 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 CELP19835 753 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 CD33P20138 364 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 IL3RAP26951 378 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 MAPK3P27361 379 aaPredicted RBP16.12■□□□□ 0.17
DDB1-220ENST00000542337 WNT4P56705 351 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 KPRPQ5T749 579 aaPredicted RBP16.12■□□□□ 0.17
DDB1-220ENST00000542337 AWAT2Q6E213 333 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 AHSA2Q719I0 299 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 ZNF485Q8NCK3 441 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 BPIFB6Q8NFQ5 453 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 PLCXD1Q9NUJ7 323 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 ZNF581Q9P0T4 197 aa16.12■□□□□ 0.17
DDB1-220ENST00000542337 SH2D7A6NKC9 451 aaPredicted RBP16.11■□□□□ 0.17
DDB1-220ENST00000542337 MT-ND4P03905 459 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 MAS1P04201 325 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 AMY1AP04745 511 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 AMY2AP04746 511 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 CD1AP06126 327 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 DOC2BQ14184 412 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 KHDC1LQ5JSQ8 128 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 ZNF497Q6ZNH5 498 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 MOB3BQ86TA1 216 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 SGCDQ92629 289 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 TRAPPC2LQ9UL33 140 aa16.11■□□□□ 0.17
DDB1-220ENST00000542337 A0A1W2PP11 408 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 A0A1W2PPE3 182 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 A0A1W2PPI3 338 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 MAGEA13PA6NCF6 341 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 CCRL2O00421 344 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 HSD17B6O14756 317 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 SPINT2O43291 252 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 PF4P02776 101 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 GNAO1P09471 354 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 HNF4GQ14541 408 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 OXLD1Q5BKU9 147 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 C6orf183Q5T699 404 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 OGFRL1Q5TC84 451 aaPredicted RBP16.1■□□□□ 0.17
DDB1-220ENST00000542337 NKAIN3Q8N8D7 197 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 MYDGFQ969H8 173 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 DERL3Q96Q80 235 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 ETAA1Q9NY74 926 aa16.1■□□□□ 0.17
DDB1-220ENST00000542337 FGF16O43320 207 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 IGKV1D-33P01593 117 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 IGKV1-33P01594 117 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 ZNF816Q0VGE8 651 aaPredicted RBP16.09■□□□□ 0.17
DDB1-220ENST00000542337 FBLN7Q53RD9 439 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 RAB12Q6IQ22 244 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 LINC00311Q8N616 119 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 C8orf31Q8N9H6 132 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 UQCC2Q9BRT2 126 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 SELENOIQ9C0D9 397 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 GFOD1Q9NXC2 390 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 PEX16Q9Y5Y5 336 aa16.09■□□□□ 0.17
DDB1-220ENST00000542337 PSMB11A5LHX3 300 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 FAM90A10PA6NDY2 464 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 FAM90A7PA6NKC0 464 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 FAM90A23PA8MXZ1 464 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 C15orf65H3BRN8 121 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
DDB1-220ENST00000542337 CA11O75493 328 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 CRTAPO75718 401 aaPredicted RBP16.08■□□□□ 0.16
DDB1-220ENST00000542337 DIAPH2-AS1Q14236 149 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 TMEM30BQ3MIR4 351 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 Q3ZCU0 254 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 SYT6Q5T7P8 510 aaPredicted RBP16.08■□□□□ 0.16
DDB1-220ENST00000542337 TRAT1Q6PIZ9 186 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 NANOGP1Q8N7R0 232 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 CHPT1Q8WUD6 406 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 FBLIM1Q8WUP2 373 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 BANF2Q9H503 90 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 NECAP2Q9NVZ3 263 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms