RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 MOSP00540 346 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 IGF1P05019 195 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 FASP25445 335 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 REG1BP48304 166 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 SLC25A30Q5SVS4 291 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 FAM71E2Q8N5Q1 922 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 OR11H1Q8NG94 326 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 MYOZ3Q8TDC0 251 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 RTN4IP1Q8WWV3 396 aaPredicted RBP10.21□□□□□ -0.77
SCARB1-207ENST00000541661 RASL11BQ9BPW5 248 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 RIBC2Q9H4K1 309 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 FAM118AQ9NWS6 357 aa10.21□□□□□ -0.77
SCARB1-207ENST00000541661 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.78
SCARB1-207ENST00000541661 TRAV39A0A0B4J263 110 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 C15orf65H3BRN8 121 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 J3QLW9 94 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF19P17023 458 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 RUNX1Q01196 453 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 PIGYQ3MUY2 71 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 Q3ZCU0 254 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF529Q6P280 563 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 AMIGO2Q86SJ2 522 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 ACBD7Q8N6N7 88 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 SUMF2Q8NBJ7 301 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 SORL1Q92673 2214 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 RNFT2Q96EX2 444 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 CPNE2Q96FN4 548 aaPredicted RBP10.2□□□□□ -0.78
SCARB1-207ENST00000541661 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 HSPB9Q9BQS6 159 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 CHCHD6Q9BRQ6 235 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 DPCDQ9BVM2 203 aaPredicted RBP10.2□□□□□ -0.78
SCARB1-207ENST00000541661 BIRC6Q9NR09 4857 aa10.2□□□□□ -0.78
SCARB1-207ENST00000541661 EXOGQ9Y2C4 368 aaKnown RBP10.2□□□□□ -0.78
SCARB1-207ENST00000541661 I3L521 148 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 GABRPO00591 440 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 VDAC1P21796 283 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 SOX6P35712 828 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF137PP52743 207 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 SNRPGP62308 76 aaKnown RBP10.19□□□□□ -0.78
SCARB1-207ENST00000541661 KIAA0141Q14154 515 aaPredicted RBP10.19□□□□□ -0.78
SCARB1-207ENST00000541661 ZSCAN26Q16670 478 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 NHLRC3Q5JS37 347 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 ASPHD1Q5U4P2 390 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 TNFAIP8L1Q8WVP5 186 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 C4orf36Q96KX1 117 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 KCTD7Q96MP8 289 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 GFOD1Q9NXC2 390 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 AP4S1Q9Y587 144 aa10.19□□□□□ -0.78
SCARB1-207ENST00000541661 TMEM212A6NML5 194 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF736B4DX44 427 aaPredicted RBP10.18□□□□□ -0.78
SCARB1-207ENST00000541661 SDCBPO00560 298 aaPredicted RBP10.18□□□□□ -0.78
SCARB1-207ENST00000541661 TXNL1O43396 289 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ORC5O43913 435 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 OR8U8P0C7N1 319 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 OR5H8P0DN80 308 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 RAB3AP20336 220 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 IL3RAP26951 378 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 PPIFP30405 207 aaKnown RBP10.18□□□□□ -0.78
SCARB1-207ENST00000541661 VHLP40337 213 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 F2RL1P55085 397 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 GALEQ14376 348 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 RSU1Q15404 277 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 MEDAGQ5VYS4 303 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF429Q86V71 674 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 SYS1Q8N2H4 156 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 OR10K1Q8NGX5 313 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ARL11Q969Q4 196 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 MRPL48Q96GC5 212 aaKnown RBP10.18□□□□□ -0.78
SCARB1-207ENST00000541661 MYCBPQ99417 103 aaPredicted RBP10.18□□□□□ -0.78
SCARB1-207ENST00000541661 GPER1Q99527 375 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 IL36GQ9NZH8 169 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF581Q9P0T4 197 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 DHDHQ9UQ10 334 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 ST3GAL6Q9Y274 331 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 STARD9Q9P2P6 4700 aa10.18□□□□□ -0.78
SCARB1-207ENST00000541661 TMEM30CPA0ZSE6 113 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 MAGEB3O15480 346 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 HTR3BO95264 441 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 LY86O95711 162 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 FCGR1AP12314 374 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 LYL1P12980 280 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF616Q08AN1 781 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 MRPL28Q13084 256 aaKnown RBP10.17□□□□□ -0.78
SCARB1-207ENST00000541661 FAM27D1Q5T7N8 215 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 LPCAT4Q643R3 524 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 SLC25A48Q6ZT89 311 aaKnown RBP10.17□□□□□ -0.78
SCARB1-207ENST00000541661 ZNF439Q8NDP4 499 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 OR51A2Q8NGJ7 313 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 OR1N2Q8NGR9 330 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 OR5AK2Q8NH90 309 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 LGALS12Q96DT0 336 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
SCARB1-207ENST00000541661 ISG20L2Q9H9L3 353 aaKnown RBP10.17□□□□□ -0.78
SCARB1-207ENST00000541661 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms