RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 DHRS11Q6UWP2 260 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 C6orf201Q7Z4U5 140 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 TMED4Q7Z7H5 227 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 LYG2Q86SG7 212 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 SGPP2Q8IWX5 399 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 POC1AQ8NBT0 407 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 NEUROG1Q92886 237 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 DVL3Q92997 716 aaPredicted RBP7.04□□□□□ -1.28
CHD4-208ENST00000540960 SLAMF9Q96A28 289 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 OR2A7Q96R45 310 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 FAAP24Q9BTP7 215 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 TLNRD1Q9H1K6 362 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 SLA2Q9H6Q3 261 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 FN3KRPQ9HA64 309 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 RANGRFQ9HD47 186 aaPredicted RBP7.04□□□□□ -1.28
CHD4-208ENST00000540960 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 MGAT4CQ9UBM8 478 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 ZDHHC8Q9ULC8 765 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 IGKV1-12A0A0C4DH73 117 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 A0A1W2PP11 408 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 F5H5P2 479 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 KNG1P01042 644 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 IGKV1D-12P01611 117 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 CD8AP01732 235 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 HLA-AP01891 365 aaKnown RBP7.03□□□□□ -1.28
CHD4-208ENST00000540960 PMP2P02689 132 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 CTSDP07339 412 aaPredicted RBP7.03□□□□□ -1.28
CHD4-208ENST00000540960 SFTPBP07988 381 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 FCGR3AP08637 254 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 PGA5P0DJD9 388 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 OR5H8P0DN80 308 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 PGAM2P15259 253 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 BCL3P20749 454 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 SRP14P37108 136 aaKnown RBP7.03□□□□□ -1.28
CHD4-208ENST00000540960 CD200P41217 278 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 ZNF83P51522 516 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 ZNF146Q15072 292 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 ABCA11PQ4W5N1 156 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 ATPAF1Q5TC12 328 aaPredicted RBP7.03□□□□□ -1.28
CHD4-208ENST00000540960 Q6ZPA2 131 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 GLCCI1Q86VQ1 547 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 CALHM1Q8IU99 346 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 SLC38A6Q8IZM9 456 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 SCCPDHQ8NBX0 429 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 BHLHE23Q8NDY6 225 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 OR2AK2Q8NG84 335 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 OR4S1Q8NGB4 309 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 OR4A4PQ8NGN8 299 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 OR11L1Q8NGX0 322 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 MITD1Q8WV92 249 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 NRIP2Q9BQI9 281 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 TMEM204Q9BSN7 226 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 TMPRSS13Q9BYE2 586 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 DECR2Q9NUI1 292 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 KCNIP1Q9NZI2 227 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 MTCH1Q9NZJ7 389 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 AK3Q9UIJ7 227 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 PCDHB10Q9UN67 800 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 GPR132Q9UNW8 380 aa7.03□□□□□ -1.28
CHD4-208ENST00000540960 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 TRDCB7Z8K6 153 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 SLC22A5O76082 557 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 PTBP3O95758 552 aaKnown RBP7.02□□□□□ -1.29
CHD4-208ENST00000540960 TGFAP01135 160 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 IFNA21P01568 189 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 CSN2P05814 226 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 CELA3BP08861 270 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 PET100P0DJ07 73 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ZNF728P0DKX0 622 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ZNF44P15621 663 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 CD40P25942 277 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 FABP6P51161 128 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ERVK11-1P61568 191 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 DHODHQ02127 395 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 DHRS2Q13268 280 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 PIGYQ3MUY2 71 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ESCO2Q56NI9 601 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 TMEM255AQ5JRV8 349 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 SPATA46Q5T0L3 261 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OR52W1Q6IF63 320 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 KCTD9Q7L273 389 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 LHFPL1Q86WI0 220 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 CMTM1Q8IZ96 169 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ZNF565Q8N9K5 539 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OR4D10Q8NGI6 311 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OR13C8Q8NGS7 320 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OR2T35Q8NGX2 323 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 PLPPR2Q96GM1 343 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 NKX3-1Q99801 234 aaPredicted RBP7.02□□□□□ -1.29
CHD4-208ENST00000540960 SULT4A1Q9BR01 284 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 DPCDQ9BVM2 203 aaPredicted RBP7.02□□□□□ -1.29
CHD4-208ENST00000540960 EGLN1Q9GZT9 426 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OR51B6Q9H340 312 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 RAB18Q9NP72 206 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 OPN4Q9UHM6 478 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 FLVCR2Q9UPI3 526 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 ATP23Q9Y6H3 246 aa7.02□□□□□ -1.29
CHD4-208ENST00000540960 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms