RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 DMKNQ6E0U4 476 aaPredicted RBP11.46□□□□□ -0.57
MSRB3-209ENST00000540804 C5orf24Q7Z6I8 188 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 OR10X1Q8NGY0 326 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 GGHQ92820 318 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 ARL11Q969Q4 196 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 MUL1Q969V5 352 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 CPNE2Q96FN4 548 aaPredicted RBP11.46□□□□□ -0.57
MSRB3-209ENST00000540804 PGLYRP3Q96LB9 341 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 IL36GQ9NZH8 169 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 AMMECR1Q9Y4X0 333 aaPredicted RBP11.46□□□□□ -0.57
MSRB3-209ENST00000540804 HSD17B6O14756 317 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 SLC31A2O15432 143 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 VHLP40337 213 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 PAX5Q02548 391 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 RIPK1Q13546 671 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 NHLRC3Q5JS37 347 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 LAIR2Q6ISS4 152 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 ETV3LQ6ZN32 361 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 REC114Q7Z4M0 266 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 HAVCR2Q8TDQ0 301 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 TMEM80Q96HE8 168 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
MSRB3-209ENST00000540804 EXOSC1Q9Y3B2 195 aaKnown RBP11.45□□□□□ -0.58
MSRB3-209ENST00000540804 TMEM30CPA0ZSE6 113 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF736B4DX44 427 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-209ENST00000540804 K7EIL1 84 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 EBAG9O00559 213 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 SDCBPO00560 298 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-209ENST00000540804 MT-ND4P03905 459 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 MYL12AP19105 171 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-209ENST00000540804 KCNJ3P48549 501 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 RAB7AP51149 207 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 ADARB1P78563 741 aaKnown RBP11.44□□□□□ -0.58
MSRB3-209ENST00000540804 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 NEK7Q8TDX7 302 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 RDH12Q96NR8 316 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 OR14A2Q96R54 314 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 S100A13Q99584 98 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 BANF2Q9H503 90 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-209ENST00000540804 KIAA2026Q5HYC2 2103 aa11.44□□□□□ -0.58
MSRB3-209ENST00000540804 TRBV5-7A0A0A0MS05 114 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 IGHV1-3A0A0C4DH29 117 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 WI2-2373I1.2A0A1W2PRP0 233 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 SERPINE3A8MV23 424 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 M0QZK8 103 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 CCRL2O00421 344 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 MAS1P04201 325 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 GNAO1P09471 354 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 GZMHP20718 246 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 ST3GAL4Q11206 333 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 Q499Y3 187 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF497Q6ZNH5 498 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 C8orf86Q6ZUL3 223 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 OR8H3Q8N146 312 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 LINC00482Q8N8I6 264 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 OR10A7Q8NGE5 316 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 OR10V1Q8NGI7 309 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 OR4K15Q8NH41 348 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
MSRB3-209ENST00000540804 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 PCDHB16Q9NRJ7 776 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 GFOD1Q9NXC2 390 aa11.43□□□□□ -0.58
MSRB3-209ENST00000540804 MRPS28Q9Y2Q9 187 aaKnown RBP11.43□□□□□ -0.58
MSRB3-209ENST00000540804 DNAH9Q9NYC9 4486 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 C12orf77C9JDV5 145 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 AIPO00170 330 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 GPX5O75715 221 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 GAPDHP04406 335 aaKnown RBP11.42□□□□□ -0.58
MSRB3-209ENST00000540804 GTF2F2P13984 249 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF134P52741 427 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 SLC35A2P78381 396 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF816Q0VGE8 651 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-209ENST00000540804 INSL4Q14641 139 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 MPV17LQ2QL34 196 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 YIF1BQ5BJH7 314 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 SLC16A12Q6ZSM3 486 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 SLC35E3Q7Z769 313 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
MSRB3-209ENST00000540804 PRR18Q8N4B5 295 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 DHRSXQ8N5I4 330 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 TMEM104Q8NE00 496 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 OR1L1Q8NH94 360 aa11.42□□□□□ -0.58
MSRB3-209ENST00000540804 IRGMA1A4Y4 181 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 FGF16O43320 207 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 IGHG2P01859 326 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 RPL23AP62750 156 aaKnown RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 EBI3Q14213 229 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 SYT6Q5T7P8 510 aaPredicted RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 TTC23Q5W5X9 447 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 OR2W3Q7Z3T1 314 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms