RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
DDB1-218ENST00000540784 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
DDB1-218ENST00000540784 CALYQ9NYX4 217 aa12.67□□□□□ -0.38
DDB1-218ENST00000540784 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
DDB1-218ENST00000540784 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
DDB1-218ENST00000540784 NSD1Q96L73 2696 aaPredicted RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 A0A075B6Q4 140 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 A0A1W2PRD5 423 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 A0A1W2PRF3 423 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 A0A1W2PRM7 423 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 NPIPB11E5RHQ5 1161 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 NPFFO15130 113 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 MMP23AO75900 390 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 GNB3P16520 340 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 OMGP23515 440 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 COX7A1P24310 79 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 SPCS2Q15005 226 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 CDNFQ49AH0 187 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 HCP5Q6MZN7 132 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 RTN4RL2Q86UN3 420 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 PNKDQ8N490 385 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 S100A16Q96FQ6 103 aaKnown RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
DDB1-218ENST00000540784 TMEM133Q9H2Q1 129 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 RAB9BQ9NP90 201 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 DIABLOQ9NR28 239 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 IDI2-AS1Q9NZ38 188 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 COMMD3Q9UBI1 195 aa12.66□□□□□ -0.38
DDB1-218ENST00000540784 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
DDB1-218ENST00000540784 CD3GP09693 182 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 HIST1H1DP16402 221 aaKnown RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 RCC1P18754 421 aaPredicted RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 NFYBP25208 207 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 SOX6P35712 828 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 LGALS4P56470 323 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 LTC4SQ16873 150 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 OLFML2AQ68BL7 652 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 C9orf139Q6ZV77 190 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 AP3S1Q92572 193 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 ISOC1Q96CN7 298 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 SUCNR1Q9BXA5 334 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 ZMAT3Q9HA38 289 aaKnown RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 MBNL3Q9NUK0 354 aaKnown RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 KCNK7Q9Y2U2 307 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 FAM96BQ9Y3D0 163 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 SOX21Q9Y651 276 aaPredicted RBP12.65□□□□□ -0.38
DDB1-218ENST00000540784 SVEP1Q4LDE5 3571 aa12.65□□□□□ -0.38
DDB1-218ENST00000540784 A0A0A6YYH2 397 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 A6NJ64 397 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 C12orf77C9JDV5 145 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 H3BMQ9 156 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 SPINT2O43291 252 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 NAPSAO96009 420 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 SSTR5P35346 364 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 TALDO1P37837 337 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 GDNFP39905 211 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 ARFRP1Q13795 201 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 MIDNQ504T8 468 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 UBE2NLQ5JXB2 153 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 RBMS3Q6XE24 437 aaKnown RBP12.64□□□□□ -0.39
DDB1-218ENST00000540784 ZNF554Q86TJ5 538 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 ABHD12Q8N2K0 398 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 ZNF418Q8TF45 676 aaPredicted RBP12.64□□□□□ -0.39
DDB1-218ENST00000540784 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 SLC6A7Q99884 636 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 CLEC7AQ9BXN2 247 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 TAF9BQ9HBM6 251 aa12.64□□□□□ -0.39
DDB1-218ENST00000540784 TRAV18A0A075B6X5 111 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 TRBV6-6A0A0A6YYG2 114 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 MFNGO00587 321 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 TOR1AO14656 332 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 ARG1P05089 322 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 GSTP1P09211 210 aaKnown RBP12.63□□□□□ -0.39
DDB1-218ENST00000540784 PRRX1P54821 245 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 CMTM3Q96MX0 182 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms