RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 IGKV1-6A0A0C4DH72 117 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 UBE2QL1A1L167 161 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 C17orf98A8MV24 154 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 C12orf77C9JDV5 145 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 F2RL2O00254 374 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 LANCL1O43813 399 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 ORC5O43913 435 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 CD74P04233 296 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 MMP9P14780 707 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 RCC1P18754 421 aaPredicted RBP8.68□□□□□ -1.02
VPS33A-204ENST00000540669 PRSS3P35030 304 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 CBX5P45973 191 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 PPP5CP53041 499 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 HLA-DRB3P79483 266 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 SCN1BQ07699 218 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 IL18Q14116 193 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 HERPUD1Q15011 391 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 ESCO2Q56NI9 601 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 KRBOX4Q5JUW0 171 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 FAM131AQ6UXB0 335 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 CLEC9AQ6UXN8 241 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 SNX29P2Q8IUI4 249 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 TPRX1Q8N7U7 411 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 CMSS1Q9BQ75 279 aaKnown RBP8.68□□□□□ -1.02
VPS33A-204ENST00000540669 CCDC32Q9BV29 185 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 TAS2R3Q9NYW6 316 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 OR6C3Q9NZP0 311 aa8.68□□□□□ -1.02
VPS33A-204ENST00000540669 UBE2J1Q9Y385 318 aaPredicted RBP8.68□□□□□ -1.02
VPS33A-204ENST00000540669 A0A087X0M5 115 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 A0A1B0GX30 115 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 FUOMA2VDF0 154 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF729A6NN14 1252 aaPredicted RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 PHF1O43189 567 aaPredicted RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 FOXH1O75593 365 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 CD3GP09693 182 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 RCVRNP35243 200 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 GNG2P59768 71 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 GNB2P62879 340 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 KLF9Q13886 244 aaPredicted RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 BAK1Q16611 211 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM249Q2WGJ8 235 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM30BQ3MIR4 351 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 LY6G6FQ5SQ64 297 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF660Q6AZW8 331 aaPredicted RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 TRAT1Q6PIZ9 186 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 BTN2A1Q7KYR7 527 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 TRAPPC6BQ86SZ2 158 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 GVQW1Q8N7I0 195 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 Q8N7P7 452 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 PHF21AQ96BD5 680 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
VPS33A-204ENST00000540669 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 NARFLQ9H6Q4 476 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 KLK11Q9UBX7 282 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
VPS33A-204ENST00000540669 MEIKINA0A087WXM9 373 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 KIR2DS1A0A191URI9 304 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 KBTBD11-OT1A0A1B0GTJ5 212 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ANKRD20A5PA0PJZ0 165 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 M0R1W7 72 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 MSMBP08118 114 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 IL7P13232 177 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 TBPP20226 339 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 CD34P28906 385 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 SSTR5P35346 364 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 GDNFP39905 211 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 LOXL3P58215 753 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ACTBP60709 375 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ACTG1P63261 375 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 IFITM3Q01628 133 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 MADCAM1Q13477 382 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ARFRP1Q13795 201 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 EDDM3AQ14507 147 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF846Q147U1 533 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 VAX1Q5SQQ9 334 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 C6orf183Q5T699 404 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 CD276Q5ZPR3 534 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 HEPN1Q6WQI6 88 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 C1orf122Q6ZSJ8 110 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 LYSMD2Q8IV50 215 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 CIARTQ8N365 385 aaPredicted RBP8.66□□□□□ -1.02
VPS33A-204ENST00000540669 Q8N402 240 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 OR10A7Q8NGE5 316 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 OR52M1Q8NGK5 317 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 OR4K15Q8NH41 348 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF596Q8TC21 504 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 NEK7Q8TDX7 302 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 TNFRSF14Q92956 283 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 CALYQ9NYX4 217 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 ANXA10Q9UJ72 324 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 INSIG2Q9Y5U4 225 aa8.66□□□□□ -1.02
VPS33A-204ENST00000540669 F8P00451 2351 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms