RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GLIPR1P48060 266 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 WIPI1Q5MNZ9 446 aaPredicted RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 TAAR3PQ9P1P4 343 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 TRAV1-1A0A0B4J248 108 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 LRRC3CA6NJW4 275 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 TRAPPC6AO75865 159 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 DFFBO76075 338 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 PDGFBP01127 241 aaPredicted RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 FOLR3P41439 243 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 GPM6AP51674 278 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 RNPS1Q15287 305 aaKnown RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 CEACAM21Q3KPI0 293 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 ZNF343Q6P1L6 599 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 TMEM45BQ96B21 275 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 MTCH1Q9NZJ7 389 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
NPC1-202ENST00000540608 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.73
NPC1-202ENST00000540608 NCKAP5O14513 1909 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 CCDC163A0A0D9SF12 145 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 NXPH3O95157 252 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 NDUFA6P56556 154 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 RPS18P62269 152 aaKnown RBP10.51□□□□□ -0.73
NPC1-202ENST00000540608 ZNF674Q2M3X9 581 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 ZNF610Q8N9Z0 462 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 RIMS4Q9H426 269 aaPredicted RBP10.51□□□□□ -0.73
NPC1-202ENST00000540608 CALHM2Q9HA72 323 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 DOK5Q9P104 306 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 PIGBOS1A0A0B4J2F0 54 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 SLC25A6P12236 298 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 F2RP25116 425 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 ERVFRD-1P60508 538 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 STX12Q86Y82 276 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 MKXQ8IYA7 352 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 GTF3AQ92664 365 aaKnown RBP10.51□□□□□ -0.73
NPC1-202ENST00000540608 ZNF845Q96IR2 970 aaPredicted RBP10.51□□□□□ -0.73
NPC1-202ENST00000540608 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 DMRT1Q9Y5R6 373 aa10.51□□□□□ -0.73
NPC1-202ENST00000540608 A0A1B0GU03 582 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 B4DEV8 164 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 TRAPPC2LH3BP13 241 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 SLC33A1O00400 549 aaPredicted RBP10.5□□□□□ -0.73
NPC1-202ENST00000540608 TNFSF12O43508 249 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 Q0VFX4 171 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 TRA2AQ13595 282 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPC1-202ENST00000540608 SLC23A3Q6PIS1 610 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 THNSL2Q86YJ6 484 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 NEK7Q8TDX7 302 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 KIAA1324LA8MWY0 1029 aaPredicted RBP10.5□□□□□ -0.73
NPC1-202ENST00000540608 HSPB6O14558 160 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 IFNA5P01569 189 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 CCNOP22674 350 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 S100GP29377 79 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 HOXA6P31267 233 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 HLA-DRB3P79483 266 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 ARF1P84077 181 aaKnown RBP10.5□□□□□ -0.73
NPC1-202ENST00000540608 GPR146Q96CH1 333 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 RAB40CQ96S21 281 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 BCL2L14Q9BZR8 327 aa10.5□□□□□ -0.73
NPC1-202ENST00000540608 NOSIPQ9Y314 301 aaKnown RBP10.5□□□□□ -0.73
NPC1-202ENST00000540608 TRBV6-6A0A0A6YYG2 114 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 YKT6O15498 198 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 MRPL33O75394 65 aaKnown RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 IGHEP01854 428 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 S100A2P29034 98 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 GFRA1P56159 465 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 ZNF324BQ6AW86 544 aaPredicted RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 MRPL21Q7Z2W9 205 aaKnown RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 H1FOOQ8IZA3 346 aaPredicted RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 OR13D1Q8NGV5 346 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 MRPL30Q8TCC3 161 aaKnown RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 LINC00470Q9BZP3 86 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
NPC1-202ENST00000540608 OR2W1Q9Y3N9 320 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 URGCP-MRPS24S4R325 110 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 CELSR3Q9NYQ7 3312 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 A0A0G2JRQ6 117 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 TDGF1P13385 188 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 P4HA3Q7Z4N8 544 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 LINC00596Q86U02 117 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 ZNF295-AS1Q8N0V1 137 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 OR5A2Q8NGI9 324 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 PLK3Q9H4B4 646 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 DEPPQ9NTK1 212 aa10.49□□□□□ -0.73
NPC1-202ENST00000540608 IGKV3D-15A0A087WSY6 115 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 C5orf49A4QMS7 147 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
NPC1-202ENST00000540608 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms