RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RIPPLY3P57055 190 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MEF2CQ06413 473 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SNAPC3Q92966 411 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C18orf12Q96KH6 178 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CCDC32Q9BV29 185 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 REG4Q9BYZ8 158 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 hADV38S2A0JD32 116 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 POM121CA8CG34 1229 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 A8MXK9 166 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ZNF273Q14593 569 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CR1LQ2VPA4 569 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TMEM200BQ69YZ2 307 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 OR52W1Q6IF63 320 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 FAM185AQ8N0U4 392 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 BEST4Q8NFU0 473 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 OR6C3Q9NZP0 311 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RPUSD1Q9UJJ7 312 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CR1P17927 2039 aa15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NSD1Q96L73 2696 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRBV23-1A0A0A0MS06 115 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CGB3P0DN86 165 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CGB7P0DN87 165 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 IL7P13232 177 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NAT1P18440 290 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ACTBP60709 375 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ACTG1P63261 375 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LOXL1Q08397 574 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SRSF7Q16629 238 aaKnown RBP eCLIP15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MOB1BQ7L9L4 216 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ZNF565Q8N9K5 539 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C8orf46Q8TAG6 207 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 UBALD1Q8TB05 177 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CORO2AQ92828 525 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SMR3AQ99954 134 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LINC00312Q9Y6C7 94 aa15.6■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LOC105371242A0A075B767 164 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRGV10A0A0A0MS01 117 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C12orf77C9JDV5 145 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ECDO95905 644 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 HEXAP06865 529 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RCVRNP35243 200 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LCN2P80188 198 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SSBP1Q04837 148 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 Q6ZS49 121 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LYSMD2Q8IV50 215 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TAF9BQ9HBM6 251 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ZNF286AQ9HBT8 521 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LPAR3Q9UBY5 353 aa15.59■□□□□ 0.09
TNFRSF1A-213ENST00000540022 PPIAL4CA0A0B4J2A2 164 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 A0A1W2PQ09 198 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRDCB7Z8K6 153 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SCTP09683 121 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GSTT2P0CG29 244 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GSTT2BP0CG30 244 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 PPIAL4GP0DN37 164 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CCL3L1P16619 93 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 HLA-DMAP28067 261 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SSTR5P35346 364 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 HLA-DRB3P79483 266 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 IFITM3Q01628 133 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 HMGN3Q15651 99 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C17orf58Q2M2W7 97 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C11orf91Q3C1V1 193 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C6orf183Q5T699 404 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CD276Q5ZPR3 534 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRIQKQ629K1 86 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LY6G5BQ8NDX9 201 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 COX4I2Q96KJ9 171 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 LPAR2Q9HBW0 351 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ABCB10Q9NRK6 738 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ANXA10Q9UJ72 324 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MGAT4AQ9UM21 535 aa15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 UBE2J1Q9Y385 318 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1A-213ENST00000540022 KIR2DS1A0A191URI9 304 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ANKRD20A5PA0PJZ0 165 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 C15orf65H3BRN8 121 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 FABP7O15540 132 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 FOXH1O75593 365 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 UPK1BO75841 260 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 GZMHP20718 246 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KIR2DS4P43632 304 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 PAX2Q02962 417 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KIR2DS1Q14954 304 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 PRR18Q8N4B5 295 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ARL11Q969Q4 196 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 DACT3Q96B18 629 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CALYQ9NYX4 217 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KCNIP1Q9NZI2 227 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ABCA1O95477 2261 aa15.58■□□□□ 0.08
TNFRSF1A-213ENST00000540022 SMAD7O15105 426 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CD3DP04234 171 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TRAT1Q6PIZ9 186 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF554Q86TJ5 538 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TOMM5Q8N4H5 51 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TMEM229BQ8NBD8 167 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR1L1Q8NH94 360 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 RFESDQ8TAC1 157 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 BORCS5Q969J3 196 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 C1orf159Q96HA4 380 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF714Q96N38 554 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms