RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 MEIS3P2A8K0S8 358 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM14DPA8MWL7 114 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 M0QZQ0 153 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TNFRSF10CO14798 259 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF324O75467 553 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 CD55P08174 381 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 OR9G9P0C7N8 305 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 NID1P14543 1247 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 HIST1H1DP16402 221 aaKnown RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ALOX5APP20292 161 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 CRYBB3P26998 211 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ADMP35318 185 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SOX2P48431 317 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 PSMB3P49720 205 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TCL1AP56279 114 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ARF3P61204 181 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GAGE5Q13069 117 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GAGE6Q13070 117 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 FHL1Q13642 323 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GABRA6Q16445 453 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 CDKN3Q16667 212 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 CCSMST1Q4G0I0 132 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 PSMG4Q5JS54 123 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GLYATL3Q5SZD4 288 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 RASL11AQ6T310 242 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF550Q7Z398 422 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 RTN4RL2Q86UN3 420 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 LRP11Q86VZ4 500 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SULF2Q8IWU5 870 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 OR8I2Q8N0Y5 310 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SLC22A24Q8N4F4 322 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ZFP62Q8NB50 900 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 OR52E2Q8NGJ4 325 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 OR51T1Q8NGJ9 327 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 OR10G9Q8NGN4 311 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 PPTC7Q8NI37 304 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SARAFQ96BY9 339 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GALMQ96C23 342 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 C18orf12Q96KH6 178 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TM2D1Q9BX74 207 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 COMMD5Q9GZQ3 224 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 NPFFR1Q9GZQ6 430 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TXNIPQ9H3M7 391 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 NRN1Q9NPD7 142 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SPANXCQ9NY87 97 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 JKAMPQ9P055 326 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 GNG13Q9P2W3 67 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF391Q9UJN7 358 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF214Q9UL59 606 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 BOKQ9UMX3 212 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-211ENST00000539921 DAPP1Q9UN19 280 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 SLC17A4Q9Y2C5 497 aa5.3□□□□□ -1.56
SNHG1-211ENST00000539921 PTPRDP23468 1912 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 MDC1Q14676 2089 aaKnown RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 A0A0B4J2E0 115 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 A0A1B0GX12 115 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 hADV38S2A0JD32 116 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OR2T8A6NH00 312 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 UPK3BL1B0FP48 263 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 UPK3BL2E5RIL1 263 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 G3V3Y1 287 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 PLPP1O14494 284 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 TNFRSF13BO14836 293 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 LDB3O75112 727 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 NUDT14O95848 222 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 HLA-DQA2P01906 255 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 HMGN2P05204 90 aaKnown RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 POU2F2P09086 479 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 WNT2P09544 360 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 SLC25A6P12236 298 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 ATP1B2P14415 290 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 HIST1H1CP16403 213 aaKnown RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 USF1P22415 310 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OMGP23515 440 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 CCKBRP32239 447 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OPRM1P35372 400 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 DRD3P35462 400 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 AESQ08117 197 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 ELAVL3Q14576 367 aaKnown RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM187Q14656 261 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OR1Q1Q15612 314 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM97Q5BJF2 176 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 WDR38Q5JTN6 314 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM42Q69YG0 159 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OR4C11Q6IEV9 310 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 KCTD18Q6PI47 426 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-211ENST00000539921 LINC00114Q6XXX2 140 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 BAGE3Q86Y29 109 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 BAGE2Q86Y30 109 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM252Q8N6L7 170 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 LINC01555Q8NAE3 123 aa5.29□□□□□ -1.56
SNHG1-211ENST00000539921 OR10V1Q8NGI7 309 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms