RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 PDCD5O14737 125 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 CRTAPO75718 401 aaPredicted RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 ZNF728P0DKX0 622 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 CCL3L1P16619 93 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 PSMD7P51665 324 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 NEDD8Q15843 81 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 KRBOX4Q5JUW0 171 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 LDLRAD2Q5SZI1 272 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 SYT6Q5T7P8 510 aaPredicted RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 TRAPPC6BQ86SZ2 158 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 MEGF9Q9H1U4 602 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 PLGRKTQ9HBL7 147 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 STUB1Q9UNE7 303 aa12.02□□□□□ -0.49
USB1-203ENST00000539737 UBE2J1Q9Y385 318 aaPredicted RBP12.02□□□□□ -0.49
USB1-203ENST00000539737 TRAV1-2A0A0B4J238 106 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 A0A1W2PP11 408 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 ODAMA1E959 279 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 C17orf98A8MV24 154 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 HSPB6O14558 160 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 SLC22A1O15245 554 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 BPNT1O95861 308 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 CD37P11049 281 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 MGMTP16455 207 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 HTR2CP28335 458 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 DLX6P56179 175 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 PAX5Q02548 391 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 DYNC1I2Q13409 638 aaKnown RBP12.01□□□□□ -0.49
USB1-203ENST00000539737 TCF23Q7RTU1 214 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 TPRX1Q8N7U7 411 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 TSPAN14Q8NG11 270 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 DPCDQ9BVM2 203 aaPredicted RBP12.01□□□□□ -0.49
USB1-203ENST00000539737 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
USB1-203ENST00000539737 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
USB1-203ENST00000539737 SLC17A2O00624 439 aa12□□□□□ -0.49
USB1-203ENST00000539737 ARG1P05089 322 aa12□□□□□ -0.49
USB1-203ENST00000539737 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
USB1-203ENST00000539737 AESQ08117 197 aa12□□□□□ -0.49
USB1-203ENST00000539737 RAB11BQ15907 218 aa12□□□□□ -0.49
USB1-203ENST00000539737 DEFB121Q5J5C9 76 aa12□□□□□ -0.49
USB1-203ENST00000539737 ATAD3CQ5T2N8 411 aa12□□□□□ -0.49
USB1-203ENST00000539737 C11orf42Q8N5U0 333 aa12□□□□□ -0.49
USB1-203ENST00000539737 SUMF2Q8NBJ7 301 aa12□□□□□ -0.49
USB1-203ENST00000539737 KCNG3Q8TAE7 436 aa12□□□□□ -0.49
USB1-203ENST00000539737 WIPF2Q8TF74 440 aaPredicted RBP12□□□□□ -0.49
USB1-203ENST00000539737 COQ2Q96H96 371 aa12□□□□□ -0.49
USB1-203ENST00000539737 Q96M66 194 aa12□□□□□ -0.49
USB1-203ENST00000539737 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
USB1-203ENST00000539737 BARHL1Q9BZE3 327 aa12□□□□□ -0.49
USB1-203ENST00000539737 SELENOIQ9C0D9 397 aa12□□□□□ -0.49
USB1-203ENST00000539737 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
USB1-203ENST00000539737 BANF2Q9H503 90 aa12□□□□□ -0.49
USB1-203ENST00000539737 RANBP3Q9H6Z4 567 aaPredicted RBP12□□□□□ -0.49
USB1-203ENST00000539737 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
USB1-203ENST00000539737 OR6C3Q9NZP0 311 aa12□□□□□ -0.49
USB1-203ENST00000539737 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
USB1-203ENST00000539737 AK6Q9Y3D8 172 aaKnown RBP12□□□□□ -0.49
USB1-203ENST00000539737 DYNC2H1Q8NCM8 4307 aaKnown RBP12□□□□□ -0.49
USB1-203ENST00000539737 DSCAML1Q8TD84 2053 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 FGF9P31371 208 aaPredicted RBP11.99□□□□□ -0.49
USB1-203ENST00000539737 GLIPR1P48060 266 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 BLCAPP62952 87 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 RBM39Q14498 530 aaKnown RBP11.99□□□□□ -0.49
USB1-203ENST00000539737 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
USB1-203ENST00000539737 C22orf42Q6IC83 251 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 C10orf99Q6UWK7 81 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 OR2W3Q7Z3T1 314 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 CORO2AQ92828 525 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 FAM46BQ96A09 425 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 GFI1Q99684 422 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 TAS2R3Q9NYW6 316 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 SSR3Q9UNL2 185 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 SESN1Q9Y6P5 492 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 V9GY05 133 aa11.99□□□□□ -0.49
USB1-203ENST00000539737 MEIKINA0A087WXM9 373 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 TMEM30CPA0ZSE6 113 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 PEX14O75381 377 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 IGHV1-8P0DP01 117 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 ARSBP15848 533 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 CD33P20138 364 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 GLP1RP43220 463 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 TIMM50Q3ZCQ8 353 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 RSBN1Q5VWQ0 802 aaPredicted RBP11.98□□□□□ -0.49
USB1-203ENST00000539737 NDUFA11Q86Y39 141 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 NDNFQ8TB73 568 aa11.98□□□□□ -0.49
USB1-203ENST00000539737 TXNL4BQ9NX01 149 aaKnown RBP11.98□□□□□ -0.49
USB1-203ENST00000539737 ING3Q9NXR8 418 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms