RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 SESN1Q9Y6P5 492 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 MSGN1A6NI15 193 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 H7C1Q1 480 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 NXPH2O95156 264 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 GRPP07492 148 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 CA7P43166 264 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 KCNJ3P48549 501 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 SRPXP78539 464 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 SNTB1Q13884 538 aaKnown RBP17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 FAM74A1Q5RGS3 127 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 C5orf24Q7Z6I8 188 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 OR4A4PQ8NGN8 299 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 PCDHB10Q9UN67 800 aa17.14■□□□□ 0.33
PACSIN3-211ENST00000539589 C3orf85A0A1B0GTC6 90 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 ACAA1P09110 424 aaPredicted RBP17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 RND3P61587 244 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 SPIN3Q5JUX0 258 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 LYZL2Q7Z4W2 148 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 FAM219AQ8IW50 185 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 C1orf174Q8IYL3 243 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 RND1Q92730 232 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 IGKV1-6A0A0C4DH72 117 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 C3orf80F5H4A9 247 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 H0YL77 283 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 GPR31O00270 319 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 DEDDO75618 318 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 OR2H2O95918 312 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 ZNF146Q15072 292 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 FIP1L1Q6UN15 594 aaKnown RBP17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 LDLRAD3Q86YD5 345 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 SLC5A7Q9GZV3 580 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 CYTL1Q9NRR1 136 aa17.13■□□□□ 0.33
PACSIN3-211ENST00000539589 M0R1B8 84 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 SH2D1BO14796 132 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 SHOXO15266 292 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 SFTPCP11686 197 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 ZNF250P15622 560 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 HLA-DRB3P79483 266 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 ZNF718Q3SXZ3 478 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 BAP18Q8IXM2 172 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 TP53RKQ96S44 253 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 TMED3Q9Y3Q3 217 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 PLCE1Q9P212 2302 aa17.12■□□□□ 0.33
PACSIN3-211ENST00000539589 SIRPB1O00241 398 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 SLC33A1O00400 549 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 TIMM8AO60220 97 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 RCC1P18754 421 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 KITLGP21583 273 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 GCH1P30793 250 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 SHEQ5VZ18 495 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 MOB1BQ7L9L4 216 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 OR10J5Q8NHC4 309 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 MUCL1Q96DR8 90 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 TMEM222Q9H0R3 208 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 CXXC4Q9H2H0 198 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 ZC4H2Q9NQZ6 224 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 ZFP57Q9NU63 452 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 ELOVL5Q9NYP7 299 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 DIDO1Q9BTC0 2240 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 TAAR5O14804 337 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 MLNRO43193 412 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 ZNF818PQ6ZRF7 136 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 TBC1D26Q86UD7 250 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 GAPTQ8N292 157 aa17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 LSM5Q9Y4Y9 91 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-211ENST00000539589 IGKV1D-13A0A0B4J2D9 117 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 IGHV3-64DA0A0J9YX35 117 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 K7EPK0 472 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 SCGB1D2O95969 90 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 IGKV1-13P0DP09 117 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 HKR1P10072 659 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 MSMPQ1L6U9 139 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 MEX3BQ6ZN04 569 aaKnown RBP17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 HSD17B13Q7Z5P4 300 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 CMTM1Q8IZ96 169 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 FAM71E2Q8N5Q1 922 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 SPERTQ8NA61 448 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 KIRREL1Q96J84 757 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 CABLES2Q9BTV7 478 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 FZR1Q9UM11 496 aa17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 UBE2J1Q9Y385 318 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-211ENST00000539589 C16orf97H3BN30 126 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 FABP6P51161 128 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 C3orf36Q3SXR2 165 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 MBNL2Q5VZF2 373 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 ZNF497Q6ZNH5 498 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 LHFPL5Q8TAF8 219 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 LRRC20Q8TCA0 184 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 OR2W1Q9Y3N9 320 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 ICE1Q9Y2F5 2266 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 MBPP02686 304 aaPredicted RBP17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 RPL12P30050 165 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 EIF5AP63241 154 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 TMEM268Q5VZI3 342 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 EIF4E3Q8N5X7 224 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 SLC35G3Q8N808 338 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 TMEM56Q96MV1 263 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 DNTTIP1Q9H147 329 aa17.09■□□□□ 0.33
PACSIN3-211ENST00000539589 HES4Q9HCC6 221 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms