RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 MUC7Q8TAX7 377 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 TMEM239Q8WW34 195 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 UBE2WQ96B02 151 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 SUCNR1Q9BXA5 334 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 BCL2L14Q9BZR8 327 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 METTL8Q9H825 291 aaKnown RBP3.07□□□□□ -1.92
TRAV11-201ENST00000539512 CLEC2DQ9UHP7 191 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 FADS3Q9Y5Q0 445 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 ADCY9O60503 1353 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 ADGRL3Q9HAR2 1447 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 MYOM2P54296 1465 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 ERVK-7P63135 1459 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 SLIT2O94813 1529 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 SAMD9LQ8IVG5 1584 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 MROH1Q8NDA8 1641 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 SHANK1Q9Y566 2161 aa3.07□□□□□ -1.92
TRAV11-201ENST00000539512 IGLV10-54A0A075B6I4 117 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 IGHV1-45A0A0A0MS14 117 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 A8MWP4 228 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 POLR3AO14802 1390 aaPredicted RBP3.06□□□□□ -1.92
TRAV11-201ENST00000539512 ADGRB2O60241 1585 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 SLIT1O75093 1534 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 NOS1P29475 1434 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 GTF2H1P32780 548 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 OLIG3Q7RTU3 272 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 CCDC124Q96CT7 223 aaKnown RBP3.06□□□□□ -1.92
TRAV11-201ENST00000539512 CYB5R1Q9UHQ9 305 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 POMPQ9Y244 141 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 MMACHCQ9Y4U1 282 aa3.06□□□□□ -1.92
TRAV11-201ENST00000539512 WDR90Q96KV7 1748 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.05□□□□□ -1.92
TRAV11-201ENST00000539512 PLXNC1O60486 1568 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 SAMD9Q5K651 1589 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 SYCP2Q9BX26 1530 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 RNASEK-C17orf49H0YIS7 233 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 PDYNP01213 254 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 CNTFRP26992 372 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 TNFRSF9Q07011 255 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 BAXQ07812 192 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 CEACAM21Q3KPI0 293 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 AADACL4Q5VUY2 407 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 LAIR2Q6ISS4 152 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 DGAT2L6Q6ZPD8 337 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 FER1L6-AS1Q8NA97 138 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 ACBD4Q8NC06 268 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 CUL9Q8IWT3 2517 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 RGPD1P0DJD0 1748 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 SPHKAPQ2M3C7 1700 aa3.05□□□□□ -1.92
TRAV11-201ENST00000539512 CACNA1AO00555 2505 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 EFCAB6Q5THR3 1501 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 NCOA3Q9Y6Q9 1424 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 MAP3K5Q99683 1374 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 IGHV2-26A0A0B4J1V2 119 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 LOC100506127A0A0U1RQW1 187 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 FABP7O15540 132 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 IGKV5-2P06315 115 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 PRDX1Q06830 199 aaKnown RBP3.04□□□□□ -1.92
TRAV11-201ENST00000539512 DHRS2Q13268 280 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 Q3ZCU0 254 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 GATD1Q8NB37 220 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 NXT1Q9UKK6 140 aaKnown RBP3.04□□□□□ -1.92
TRAV11-201ENST00000539512 ZNF443Q9Y2A4 671 aaPredicted RBP3.04□□□□□ -1.92
TRAV11-201ENST00000539512 U3KQK5 164 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 NUP188Q5SRE5 1749 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 MYO5CQ9NQX4 1742 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 TET3O43151 1660 aa3.04□□□□□ -1.92
TRAV11-201ENST00000539512 C1orf167Q5SNV9 1468 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CLIP1P30622 1438 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 SCN4AP35499 1836 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 UBR1Q8IWV7 1749 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 TNS1Q9HBL0 1735 aaKnown RBP3.03□□□□□ -1.92
TRAV11-201ENST00000539512 OR5H14A6NHG9 310 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 ARGFXA6NJG6 315 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 PLPP3O14495 311 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 TCF21O43680 179 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 PDCD6O75340 191 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 GYPCP04921 128 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CTSGP08311 255 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CCL2P13500 99 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 ETV1P50549 477 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CST6Q15828 149 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 BSXQ3C1V8 233 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 LRRC6Q86X45 466 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 KRTAP13-1Q8IUC0 172 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 OR2AE1Q8NHA4 323 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CLDN23Q96B33 292 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 CPB2Q96IY4 423 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 TAPBPLQ9BX59 468 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 IFT46Q9NQC8 304 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 KCNIP2Q9NS61 270 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 BTRCQ9Y297 605 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 TICRRQ7Z2Z1 1910 aa3.03□□□□□ -1.92
TRAV11-201ENST00000539512 ABCC5O15440 1437 aa3.02□□□□□ -1.93
TRAV11-201ENST00000539512 TROQ12816 1431 aaPredicted RBP3.02□□□□□ -1.93
TRAV11-201ENST00000539512 CRXO43186 299 aaPredicted RBP3.02□□□□□ -1.93
TRAV11-201ENST00000539512 EEF1E1O43324 174 aaKnown RBP3.02□□□□□ -1.93
TRAV11-201ENST00000539512 GABRA1P14867 456 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms