RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 OR52M1Q8NGK5 317 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 CAPSLQ8WWF8 208 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 RPEQ96AT9 228 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 WNT10AQ9GZT5 417 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 RAB9BQ9NP90 201 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 ZNF581Q9P0T4 197 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 A0A1W2PP11 408 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 H0YHG0 523 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 M0QZK8 103 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 ORC5O43913 435 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 SC5DO75845 299 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 TSPAN15O95858 294 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 UBBP0CG47 229 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 VSIG10L2P0DP72 767 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 IRF3Q14653 427 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 ACSM3Q53FZ2 586 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 UNQ9370/PRO34162Q6UXP9 181 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 THNSL2Q86YJ6 484 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 GAPTQ8N292 157 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
RTN3-209ENST00000538995 TOMM40LQ969M1 308 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 Q96M66 194 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 RBM14Q96PK6 669 aaKnown RBP9.26□□□□□ -0.93
RTN3-209ENST00000538995 OR5M11Q96RB7 305 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 CST11Q9H112 138 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 DUSP21Q9H596 190 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 PSG11Q9UQ72 335 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
RTN3-209ENST00000538995 KIAA2026Q5HYC2 2103 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 MCRIP1C9JLW8 97 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 C15orf65H3BRN8 121 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 AIPO00170 330 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 PEX14O75381 377 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 FBXO24O75426 580 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 MT-ND4P03905 459 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 FAM106CPP0CH98 169 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 MGMTP16455 207 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 VDAC2P45880 294 aaPredicted RBP9.25□□□□□ -0.93
RTN3-209ENST00000538995 RAB7AP51149 207 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
RTN3-209ENST00000538995 ARSJQ5FYB0 599 aaPredicted RBP9.25□□□□□ -0.93
RTN3-209ENST00000538995 UTF1Q5T230 341 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 C6orf183Q5T699 404 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 GLT8D1Q68CQ7 371 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 RAB12Q6IQ22 244 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 TRAT1Q6PIZ9 186 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 OR8H3Q8N146 312 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 LINC00311Q8N616 119 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 OR10X1Q8NGY0 326 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 RFESDQ8TAC1 157 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 UFD1Q92890 307 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 SLC25A33Q9BSK2 321 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 TMED9Q9BVK6 235 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 ISYNA1Q9NPH2 558 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 ETAA1Q9NY74 926 aa9.25□□□□□ -0.93
RTN3-209ENST00000538995 A0A1W2PPI3 338 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 SPINT2O43291 252 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 RGS10O43665 173 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 PDCD6O75340 191 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 CRTAPO75718 401 aaPredicted RBP9.24□□□□□ -0.93
RTN3-209ENST00000538995 UCHL1P09936 223 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 FUT3P21217 361 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 PSMA1P25786 263 aaKnown RBP9.24□□□□□ -0.93
RTN3-209ENST00000538995 GP2P55259 537 aaKnown RBP9.24□□□□□ -0.93
RTN3-209ENST00000538995 BLCAPP62952 87 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 MED22Q15528 200 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 TRAM1Q15629 374 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 HSD17B12Q53GQ0 312 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 RBM48Q5RL73 367 aaKnown RBP9.24□□□□□ -0.93
RTN3-209ENST00000538995 C1orf100Q5SVJ3 147 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 PRSS48Q7RTY5 328 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 ZNF554Q86TJ5 538 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 LRRTM1Q86UE6 522 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 NDUFA11Q86Y39 141 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 TMEM104Q8NE00 496 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 ARL11Q969Q4 196 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 SELENOIQ9C0D9 397 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 BANF2Q9H503 90 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 GFOD1Q9NXC2 390 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 PEX16Q9Y5Y5 336 aa9.24□□□□□ -0.93
RTN3-209ENST00000538995 TRAV39A0A0B4J263 110 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 SDCBPO00560 298 aaPredicted RBP9.23□□□□□ -0.93
RTN3-209ENST00000538995 WIPF1O43516 503 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 OPN1MWP04001 364 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 OPN1MW2P0DN77 364 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 OPN1MW3P0DN78 364 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 CD37P11049 281 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 CRHBPP24387 322 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 CD24P25063 80 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 IL3RAP26951 378 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 GNG10P50151 68 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 LOXL3P58215 753 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 ZNF816Q0VGE8 651 aaPredicted RBP9.23□□□□□ -0.93
RTN3-209ENST00000538995 MLLT11Q13015 90 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms