RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 SELLP14151 372 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 LHX2P50458 406 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 PPT1P50897 306 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 EWSR1Q01844 656 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF695Q8IW36 515 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 MKXQ8IYA7 352 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 LFNGQ8NES3 379 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 APOBEC3DQ96AK3 386 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 UBE2J1Q9Y385 318 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 A0A1B0GW64 132 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 NKX2-6A6NCS4 301 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 PRH1P02810 166 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 KIR2DS4P43632 304 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 NKX2-1P43699 371 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF266Q14584 549 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 SPINK14Q6IE38 97 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 MRPL21Q7Z2W9 205 aaKnown RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 TBC1D26Q86UD7 250 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 SELENOHQ8IZQ5 122 aaKnown RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 SLAMF9Q96A28 289 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
CDCA3-207ENST00000538862 TUBA4BQ9H853 241 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 B4GALT7Q9UBV7 327 aa12.44□□□□□ -0.42
CDCA3-207ENST00000538862 SS18L1O75177 396 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-207ENST00000538862 TUSC2O75896 110 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 CCL11P51671 97 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 GPM6AP51674 278 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 CLDN18P56856 261 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 OR5A2Q8NGI9 324 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 PBDC1Q9BVG4 233 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
CDCA3-207ENST00000538862 FGF23Q9GZV9 251 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SMDT1Q9H4I9 107 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF703Q9H7S9 590 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-207ENST00000538862 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 TP53TG5Q9Y2B4 290 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF724A8MTY0 619 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 TRAPPC2LH3BP13 241 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 PITX3O75364 302 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 NEURL1O76050 574 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SYNGR4O95473 234 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 MMP9P14780 707 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 CCNOP22674 350 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 ARR3P36575 388 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 BPIFB3P59826 476 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 RNF212Q495C1 297 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SPIN3Q5JUX0 258 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 LINC00596Q86U02 117 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 TUSC5Q8IXB3 177 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SH3BGRL3Q9H299 93 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 PLK3Q9H4B4 646 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 ATP23Q9Y6H3 246 aa12.43□□□□□ -0.42
CDCA3-207ENST00000538862 SLC22A20A6NK97 555 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 K7N7A8 449 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 F10P00742 488 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 IFNA4P05014 189 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 SCTP09683 121 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 UCP1P25874 307 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 RAB5BP61020 215 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 SRYQ05066 204 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 IL22RA2Q969J5 263 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 RPS10P5Q9NQ39 176 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-207ENST00000538862 MTCH1Q9NZJ7 389 aa12.42□□□□□ -0.42
CDCA3-207ENST00000538862 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
CDCA3-207ENST00000538862 A0A096LPE4 126 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 HLA-HP01893 362 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 VDAC1P21796 283 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 FHITP49789 147 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 AKR1D1P51857 326 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 ABHD17BQ5VST6 288 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 GAPTQ8N292 157 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 OR8G5Q8NG78 346 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 SLC35B3Q9H1N7 401 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 ESRP2Q9H6T0 727 aaKnown RBP12.41□□□□□ -0.42
CDCA3-207ENST00000538862 CALHM2Q9HA72 323 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms