RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 PRKACAP17612 351 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 IL32P24001 234 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 LMO1P25800 156 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 MDH2P40926 338 aaKnown RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 LPAR6P43657 344 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 UCP2P55851 309 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 TMEM33P57088 247 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 ERVK11-1P61568 191 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 BLOC1S1P78537 153 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 ARG2P78540 354 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 TSC22D1Q15714 1073 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 PXDC1Q5TGL8 231 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 HAGHLQ6PII5 290 aaPredicted RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 WDR86Q86TI4 376 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 TBC1D26Q86UD7 250 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 SELENOHQ8IZQ5 122 aaKnown RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 SPAG16Q8N0X2 631 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 FAM58AQ8N1B3 248 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 BATF2Q8N1L9 274 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 SUMF2Q8NBJ7 301 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 OR52M1Q8NGK5 317 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 LILRB1Q8NHL6 650 aaPredicted RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 BSCL2Q96G97 398 aaPredicted RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 NKX6-2Q9C056 277 aaPredicted RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 WFDC1Q9HC57 220 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 TREM2Q9NZC2 230 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 RCL1Q9Y2P8 373 aaKnown RBP7.86□□□□□ -1.15
DDB1-211ENST00000538280 MYO9AB2RTY4 2548 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 CSMD1Q96PZ7 3565 aa7.86□□□□□ -1.15
DDB1-211ENST00000538280 IGKV1D-13A0A0B4J2D9 117 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 LRP5LA4QPB2 252 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 ZNF705EA8MWA4 302 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 H0Y980 276 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 AQP7O14520 342 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 DEGS1O15121 323 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SIGLEC5O15389 551 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 FBXO24O75426 580 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 CNOT4O95628 575 aaKnown RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 SCGB1D2O95969 90 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 TK1P04183 234 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 ACAA1P09110 424 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 IGKV1-13P0DP09 117 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SFTPCP11686 197 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 MMP9P14780 707 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 CAV2P51636 162 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 GABRA6Q16445 453 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 TBC1D28Q2M2D7 210 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 NMSQ5H8A3 153 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 ZNF324BQ6AW86 544 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 OR2T2Q6IF00 324 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 ZNF818PQ6ZRF7 136 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 MOB1BQ7L9L4 216 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 C5orf24Q7Z6I8 188 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 MYPOPQ86VE0 399 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 FOXRED2Q8IWF2 684 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 H1FOOQ8IZA3 346 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 OR5D13Q8NGL4 314 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SPIN2AQ99865 258 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SPIN2BQ9BPZ2 258 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 NRIP2Q9BQI9 281 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 RTL8AQ9BWD3 113 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SEC11CQ9BY50 192 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 TP53TG5Q9Y2B4 290 aa7.85□□□□□ -1.15
DDB1-211ENST00000538280 SPTBN1Q01082 2364 aaKnown RBP7.85□□□□□ -1.15
DDB1-211ENST00000538280 NKX2-6A6NCS4 301 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 IQCF6A8MYZ5 107 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 FAM157AC9JC47 383 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.84□□□□□ -1.15
DDB1-211ENST00000538280 MED6O75586 246 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 RHBDL1O75783 438 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 CD5P06127 495 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 SPP1P10451 314 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 RAC2P15153 192 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 MUC1P15941 1255 aaPredicted RBP7.84□□□□□ -1.15
DDB1-211ENST00000538280 COX5AP20674 150 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 CA6P23280 308 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 F2RL1P55085 397 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 PPP1CBP62140 327 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 PMP22Q01453 160 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 EWSR1Q01844 656 aaKnown RBP eCLIP7.84□□□□□ -1.15
DDB1-211ENST00000538280 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 C20orf204Q6ZNR8 217 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 Q8IYB0 196 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 PUSL1Q8N0Z8 303 aaKnown RBP7.84□□□□□ -1.15
DDB1-211ENST00000538280 SVBPQ8N300 66 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 ZNF565Q8N9K5 539 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 C1orf162Q8NEQ5 155 aaPredicted RBP7.84□□□□□ -1.15
DDB1-211ENST00000538280 OR5T2Q8NGG2 359 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 PLPPR1Q8TBJ4 325 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 ABHD17AQ96GS6 310 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 ZNF488Q96MN9 340 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 TSNAXQ99598 290 aaKnown RBP7.84□□□□□ -1.15
DDB1-211ENST00000538280 ZC4H2Q9NQZ6 224 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 CCL28Q9NRJ3 127 aa7.84□□□□□ -1.15
DDB1-211ENST00000538280 UQCC1Q9NVA1 299 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms