RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MVDP53602 400 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RBM11P57052 281 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 LCN2P80188 198 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 TBR1Q16650 682 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RAB40CQ96S21 281 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 DCTN5Q9BTE1 182 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 YAE1D1Q9NRH1 226 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR2C1O95371 312 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 BSPH1Q075Z2 132 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 DCAF12L2Q5VW00 463 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 GPR137Q96N19 417 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 WFDC6Q9BQY6 131 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR51I2Q9H344 312 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 CHCHD2Q9Y6H1 151 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 ZFC3H1O60293 1989 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 NDUFB6O95139 128 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 LALBAP00709 142 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 GALP22466 123 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 KIAA0141Q14154 515 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 C11orf87Q6NUJ2 197 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 UNQ6494/PRO21346Q6UXR6 183 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 KCNK17Q96T54 332 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RYDENQ9NUL5 291 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 METTL1Q9UBP6 276 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 KCNE5Q9UJ90 142 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RALYQ9UKM9 306 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR51B2Q9Y5P1 312 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR4C45A6NMZ5 311 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 C1QBP02746 253 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 GAPDHP04406 335 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 PSG2P11465 335 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 TNFSF10P50591 281 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 DYNLT3P51808 116 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RAB32Q13637 225 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 CADM3Q8N126 398 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 BVESQ8NE79 360 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RBPMSQ93062 196 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 LEAP2Q969E1 77 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 GOLT1BQ9Y3E0 138 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 CNTRLQ7Z7A1 2325 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 THSD7BQ9C0I4 1608 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 COL4A6Q14031 1691 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 LMX1BO60663 402 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 PPYP01298 95 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 POLR2GP62487 172 aaKnown RBP eCLIP4.64□□□□□ -1.67
LRP6-203ENST00000538239 PAFAH1B2P68402 229 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 DHRS2Q13268 280 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 CRIPAKQ8N1N5 446 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 Q8WTZ3 238 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 MRGPRFQ96AM1 343 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 ABHD14BQ96IU4 210 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RAB18Q9NP72 206 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 FOXD3Q9UJU5 478 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 THADAQ6YHU6 1953 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 ANKRD36A6QL64 1941 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 TMEM229AB2RXF0 380 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 H7BYZ3 331 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RAB29O14966 203 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 SYNGR3O43761 229 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 HBZP02008 142 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 NTF3P20783 257 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 LIAT1Q6ZQX7 453 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 RBPMS2Q6ZRY4 209 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 MYPOPQ86VE0 399 aaPredicted RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 APCDD1LQ8NCL9 501 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR4A4PQ8NGN8 299 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 ZNF716A6NP11 495 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 B9A039 149 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 BCL2L11O43521 198 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CDKN1AP38936 164 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 C8orf82Q6P1X6 216 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 BTF3L4Q96K17 158 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 NUDT16L1Q9BRJ7 211 aaKnown RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 CHRDL1Q9BU40 450 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 SH2D2AQ9NP31 389 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 AKIP1Q9NQ31 210 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 OR2W1Q9Y3N9 320 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 VSIG8P0DPA2 414 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 FOXB2Q5VYV0 432 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 RPS4Y2Q8TD47 263 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 PF4P02776 101 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 NANOS3P60323 173 aaKnown RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 NCR3LG1Q68D85 454 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 OR4D10Q8NGI6 311 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 LILRB1Q8NHL6 650 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 SSMEM1Q8WWF3 244 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 C14orf79Q96F83 325 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 RBM14Q96PK6 669 aaKnown RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 CTDSP1Q9GZU7 261 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 PRNDQ9UKY0 176 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 A0A0U1RQV5 110 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 MGST3O14880 152 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 IGKV3-11P04433 115 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 EFNB2P52799 333 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 IGLV3-21P80748 117 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 Q6ZT83 130 aa4.63□□□□□ -1.67
LRP6-203ENST00000538239 CENPVQ7Z7K6 275 aaPredicted RBP4.63□□□□□ -1.67
LRP6-203ENST00000538239 NFAM1Q8NET5 270 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms