RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 IL21Q9HBE4 155 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 MYO7AQ13402 2215 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 HIDE1A8MVS5 230 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 HLA-DOBP13765 273 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 SLC6A8P48029 635 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 UBE2G2P60604 165 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ZNF266Q14584 549 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 TESK1Q15569 626 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR5AS1Q8N127 324 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR5B12Q96R08 314 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 PCBD2Q9H0N5 130 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ZNF430Q9H8G1 570 aaPredicted RBP9.22□□□□□ -0.93
RTN3-208ENST00000537981 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 DAPP1Q9UN19 280 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 C5orf63A6NC05 138 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 B4DGG1 531 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ZNF732B4DXR9 585 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ZNF814B7Z6K7 855 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 TNFRSF10CO14798 259 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 MMP23AO75900 390 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 CLEC3BP05452 202 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 WNT2P09544 360 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 DUSP1P28562 367 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 BLVRBP30043 206 aaPredicted RBP9.22□□□□□ -0.93
RTN3-208ENST00000537981 RAB28P51157 221 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 HNRNPA3P51991 378 aaKnown RBP9.22□□□□□ -0.93
RTN3-208ENST00000537981 TAS2R30P59541 319 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 POU3F1Q03052 451 aaPredicted RBP9.22□□□□□ -0.93
RTN3-208ENST00000537981 SHBQ15464 509 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ACKR1Q16570 336 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.22□□□□□ -0.935e-6■■■□□ 15.4
RTN3-208ENST00000537981 ATG4DQ86TL0 474 aaPredicted RBP9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR14C36Q8NHC7 312 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR51E1Q8TCB6 317 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR51I2Q9H344 312 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 NAA60Q9H7X0 242 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 OR1A2Q9Y585 309 aa9.22□□□□□ -0.93
RTN3-208ENST00000537981 H0YIG0 161 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 NKX2-2O95096 273 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 DEFA4P12838 97 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 VAMP3Q15836 100 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 TMEM41BQ5BJD5 291 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 ABHD3Q8WU67 409 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 THRSPQ92748 146 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 BADQ92934 168 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PINX1Q96BK5 328 aaKnown RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 PERPQ96FX8 193 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PECRQ9BY49 303 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 WWTR1Q9GZV5 400 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 NAT8Q9UHE5 227 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 ERRFI1Q9UJM3 462 aaPredicted RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 TBX21Q9UL17 535 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 VDAC3Q9Y277 283 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 ADAMTS9Q9P2N4 1935 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PRSS37A4D1T9 235 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 C1QTNF9BB2RNN3 333 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PDGFBP01127 241 aaPredicted RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 ARR3P36575 388 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 TMEM267Q0VDI3 215 aaPredicted RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 GNMTQ14749 295 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 C3orf36Q3SXR2 165 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 FBXO42Q6P3S6 717 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 KCTD18Q6PI47 426 aaPredicted RBP9.21□□□□□ -0.94
RTN3-208ENST00000537981 CRIP3Q6Q6R5 217 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 CYP2G1PQ6ZSU1 146 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 DEFB128Q7Z7B8 93 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 DTX1Q86Y01 620 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 C20orf196Q8IYI0 205 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PSMF1Q92530 271 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 NAT6Q93015 286 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 SARAFQ96BY9 339 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 MEGF9Q9H1U4 602 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PARLQ9H300 379 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 CLN8Q9UBY8 286 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 WIPI2Q9Y4P8 454 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 PXMP4Q9Y6I8 212 aa9.21□□□□□ -0.94
RTN3-208ENST00000537981 SEMA4FO95754 770 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ISG15P05161 165 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 TAS2R46P59540 309 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ELAVL3Q14576 367 aaKnown RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 TCTN1Q2MV58 587 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 TMEM177Q53S58 311 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 CISD2Q8N5K1 135 aaKnown RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 MFSD9Q8NBP5 474 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ARRDC3Q96B67 414 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ZNF501Q96CX3 271 aaPredicted RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 NEIL1Q96FI4 390 aaPredicted RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 SLC2A9Q9NRM0 540 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 STARD5Q9NSY2 213 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 LSM7Q9UK45 103 aaKnown RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 RALGAPA1Q6GYQ0 2036 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 IGLON5A6NGN9 336 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms