RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 H0Y980 276 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 SLC33A1O00400 549 aaPredicted RBP11.52□□□□□ -0.57
SMG6-203ENST00000536871 MMP9P14780 707 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 UCP1P25874 307 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 SSTP61278 116 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 FOXF2Q12947 444 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 WDR86Q86TI4 376 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 TBC1D26Q86UD7 250 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 OR5D13Q8NGL4 314 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 PCNPQ8WW12 178 aaKnown RBP11.52□□□□□ -0.57
SMG6-203ENST00000536871 SAT2Q96F10 170 aaPredicted RBP11.52□□□□□ -0.57
SMG6-203ENST00000536871 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
SMG6-203ENST00000536871 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.57
SMG6-203ENST00000536871 FRYLO94915 3013 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 CDIPTO14735 213 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 S100A8P05109 93 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 SP6Q3SY56 376 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 PCSK4Q6UW60 755 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 NKX6-2Q9C056 277 aaPredicted RBP11.51□□□□□ -0.57
SMG6-203ENST00000536871 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 MLXQ9UH92 298 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 TRAPPC2LQ9UL33 140 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 POMT1Q9Y6A1 747 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 BORCS7-ASMTA0A0B4J1R7 106 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 C1QTNF9BB2RNN3 333 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 HSPB6O14558 160 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 ZNHIT1O43257 154 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 GPR137BO60478 399 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 SLC25A6P12236 298 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 VDAC1P21796 283 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 ERVS71-1P61550 626 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 RPS23P62266 143 aaKnown RBP11.51□□□□□ -0.57
SMG6-203ENST00000536871 HFEQ30201 348 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 ZNF324BQ6AW86 544 aaPredicted RBP11.51□□□□□ -0.57
SMG6-203ENST00000536871 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 FAM90A1Q86YD7 464 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
SMG6-203ENST00000536871 LSM5Q9Y4Y9 91 aaKnown RBP11.51□□□□□ -0.57
SMG6-203ENST00000536871 IGHV1-18A0A0C4DH31 117 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 HAND1O96004 215 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
SMG6-203ENST00000536871 MPV17P39210 176 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 CD200P41217 278 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 MSMO1Q15800 293 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 RBMXL3Q8N7X1 1067 aaKnown RBP11.5□□□□□ -0.57
SMG6-203ENST00000536871 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
SMG6-203ENST00000536871 ZBTB34Q8NCN2 500 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 FAM57AQ8TBR7 257 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 ARL11Q969Q4 196 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 TP53RKQ96S44 253 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 OPN3Q9H1Y3 402 aaPredicted RBP11.5□□□□□ -0.57
SMG6-203ENST00000536871 BARX1Q9HBU1 254 aaPredicted RBP11.5□□□□□ -0.57
SMG6-203ENST00000536871 TAS2R3Q9NYW6 316 aa11.5□□□□□ -0.57
SMG6-203ENST00000536871 IGKV1-6A0A0C4DH72 117 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 RNF212BA8MTL3 300 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.49□□□□□ -0.57
SMG6-203ENST00000536871 AGFG2O95081 481 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 GRPP07492 148 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 F2RP25116 425 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 CEACAM8P31997 349 aaPredicted RBP11.49□□□□□ -0.57
SMG6-203ENST00000536871 PAX5Q02548 391 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 HMGN3Q15651 99 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 UBAC2Q8NBM4 344 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
SMG6-203ENST00000536871 TAF9BQ9HBM6 251 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 TINAGQ9UJW2 476 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 WASF3Q9UPY6 502 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 MED12LQ86YW9 2145 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 SIRPB1O00241 398 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 SCGB1D2O95969 90 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 CRYAAP02489 173 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 NKX2-1P43699 371 aaPredicted RBP11.49□□□□□ -0.57
SMG6-203ENST00000536871 BLOC1S1P78537 153 aa11.49□□□□□ -0.57
SMG6-203ENST00000536871 IL34Q6ZMJ4 242 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms