RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 J3QR06 171 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 UCHL1P09936 223 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 SRMP19623 302 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 HSPA13P48723 471 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 RAB12Q6IQ22 244 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 PRSS48Q7RTY5 328 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 NKAIN3Q8N8D7 197 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 ARL11Q969Q4 196 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 Q96M66 194 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 GFI1Q99684 422 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 MMP28Q9H239 520 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 RANBP3Q9H6Z4 567 aaPredicted RBP11.44□□□□□ -0.58
UBE3B-206ENST00000536398 SERTAD4Q9NUC0 356 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 PEX16Q9Y5Y5 336 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 IGHV3-43A0A0B4J1X8 118 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 UBE2QL1A1L167 161 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 MCRIP1C9JLW8 97 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 IGHV3-43DP0DP04 118 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 CD37P11049 281 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 CPEP16870 476 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 GZMHP20718 246 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 FABP5Q01469 135 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 C1orf100Q5SVJ3 147 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 KLHDC1Q8N7A1 406 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 OR4K15Q8NH41 348 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 THRSPQ92748 146 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
UBE3B-206ENST00000536398 MGLLQ99685 303 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 RAB26Q9ULW5 256 aa11.43□□□□□ -0.58
UBE3B-206ENST00000536398 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-206ENST00000536398 AIPO00170 330 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 MPIG6BO95866 241 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 VSIG8P0DPA2 414 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 MLLT11Q13015 90 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-206ENST00000536398 UNC119Q13432 240 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 TMEM95Q3KNT9 176 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-206ENST00000536398 GLT8D1Q68CQ7 371 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 Q8N2B8 174 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 SPACA1Q9HBV2 294 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 ISYNA1Q9NPH2 558 aa11.42□□□□□ -0.58
UBE3B-206ENST00000536398 AK6Q9Y3D8 172 aaKnown RBP11.42□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A10PA6NDY2 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A18PA6NE21 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A16PA6NEW6 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A20PA6NIJ5 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A7PA6NKC0 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A12PA8MX19 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A5PA8MXJ8 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A23PA8MXZ1 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 C12orf77C9JDV5 145 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 SDCBPO00560 298 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-206ENST00000536398 TIMM23O14925 209 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 TSPAN15O95858 294 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A15PP0C7V4 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A13PP0C7W8 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A14PP0C7W9 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FAM90A24PP0C7X0 464 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 RCC1P18754 421 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-206ENST00000536398 FUT3P21217 361 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 CEACAM3P40198 252 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 LOXL3P58215 753 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 QRFPP83859 136 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 P2RY14Q15391 338 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 SSX1Q16384 188 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 NKAPLQ5M9Q1 402 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 GAPTQ8N292 157 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 OR10A7Q8NGE5 316 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 OR1L1Q8NH94 360 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 RPEQ96AT9 228 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 CREB3L1Q96BA8 519 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 RBMXL1Q96E39 390 aaKnown RBP11.41□□□□□ -0.58
UBE3B-206ENST00000536398 SULT4A1Q9BR01 284 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 ACOT13Q9NPJ3 140 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 GHRLQ9UBU3 117 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
UBE3B-206ENST00000536398 VWFP04275 2813 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 A0A1W2PPI3 338 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 M0QZ24 198 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 SLC22A1O15245 554 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 SLC31A2O15432 143 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 ORC5O43913 435 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 PDCD6O75340 191 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 AMY1AP04745 511 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 AMY2AP04746 511 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 HTR2CP28335 458 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 BRS3P32247 399 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 EMX1Q04741 257 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms