RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 RAB9BQ9NP90 201 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CHCHD3Q9NX63 227 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TMEM212A6NML5 194 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR4C45A6NMZ5 311 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR7C1O76099 320 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 HTR3BO95264 441 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 MOSP00540 346 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CSTBP04080 98 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR8U8P0C7N1 319 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GZMHP20718 246 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 POLR2IP36954 125 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 INSL3P51460 131 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 MRPL28Q13084 256 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 EBI3Q14213 229 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PIGYQ3MUY2 71 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 NKAPLQ5M9Q1 402 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SUMF2Q8NBJ7 301 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR10K1Q8NGX5 313 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR5AK2Q8NH90 309 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 MUC7Q8TAX7 377 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ARL11Q969Q4 196 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PELI1Q96FA3 418 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ALG8Q9BVK2 526 aa10.17□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TRAV39A0A0B4J263 110 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SAC3D1A6NKF1 404 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 LINC01548A6NM66 108 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GABRPO00591 440 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CD2P06729 351 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CD1BP29016 333 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PAX5Q02548 391 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ATAD3CQ5T2N8 411 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 C1orf146Q5VVC0 180 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 STX19Q8N4C7 294 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PARP16Q8N5Y8 322 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 Q8N9W7 124 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR52M1Q8NGK5 317 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RTN4IP1Q8WWV3 396 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 S1PR3Q99500 378 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 METTL9Q9H1A3 318 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OAZ3Q9UMX2 235 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ST3GAL6Q9Y274 331 aa10.16□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IGHV3-43A0A0B4J1X8 118 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IGHG4P01861 327 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IGHV3-43DP0DP04 118 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GBX2P52951 348 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PPP3R1P63098 170 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 DOC2BQ14184 412 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 LINC00596Q86U02 117 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SYS1Q8N2H4 156 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 LINC00311Q8N616 119 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 Q8N6K4 173 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RNF152Q8N8N0 203 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CCDC107Q8WV48 283 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 KCTD7Q96MP8 289 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PAK1IP1Q9NWT1 392 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GFOD1Q9NXC2 390 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GNG12Q9UBI6 72 aa10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZNF107Q9UII5 783 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-207ENST00000535958 AIPO00170 330 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SPINT2O43291 252 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SERPINA2P20848 420 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 MYF6P23409 242 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SOX2P48431 317 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 ZNF616Q08AN1 781 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 FHL3Q13643 280 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 GALEQ14376 348 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 MMDQ15546 238 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 Q3ZCU0 254 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 LHFPL3Q86UP9 236 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 ZNF429Q86V71 674 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 C8orf31Q8N9H6 132 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 OR52N1Q8NH53 320 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 UBALD1Q8TB05 177 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SLC7A6OSQ96CW6 309 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 CENPNQ96H22 339 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 PDCD1LG2Q9BQ51 273 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 HSPB9Q9BQS6 159 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 CHCHD6Q9BRQ6 235 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 ISYNA1Q9NPH2 558 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 TAS2R4Q9NYW5 299 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SCOCQ9UIL1 159 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 ING4Q9UNL4 249 aa10.14□□□□□ -0.79
TNFRSF1A-207ENST00000535958 J3QRE1 110 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 ORC5O43913 435 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SAP30O75446 220 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 CDRT1O95170 752 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 FADS2O95864 444 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SLC2A2P11168 524 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 LYL1P12980 280 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 PSMB8P28062 276 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 RASSF2P50749 326 aa10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 SNRPGP62308 76 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 GABPB1Q06547 395 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-207ENST00000535958 TMEM30BQ3MIR4 351 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms