RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CDPF1Q6NVV7 123 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 ZNF585AQ6P3V2 769 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 MRPL21Q7Z2W9 205 aaKnown RBP6.78□□□□□ -1.32
COL21A1-212ENST00000535941 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 OR8G5Q8NG78 346 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 OR5AP2Q8NGF4 316 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 PRR7Q8TB68 274 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 KLF14Q8TD94 323 aaPredicted RBP6.78□□□□□ -1.32
COL21A1-212ENST00000535941 MAFIPQ8WZ33 124 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 EXTL1Q92935 676 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 DVL3Q92997 716 aaPredicted RBP6.78□□□□□ -1.32
COL21A1-212ENST00000535941 SNRNP40Q96DI7 357 aaKnown RBP6.78□□□□□ -1.32
COL21A1-212ENST00000535941 SHPKQ9UHJ6 478 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 SLC7A11Q9UPY5 501 aa6.78□□□□□ -1.32
COL21A1-212ENST00000535941 A6NLC8 198 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 J3QT63 122 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GEMIN2O14893 280 aaKnown RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 CYB5AP00167 134 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ADH4P08319 380 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 NAAAQ02083 359 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 RSU1Q15404 277 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 C2orf68Q2NKX9 166 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 UNQ6126/PRO20091Q6UXV3 157 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 OR5D18Q8NGL1 313 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 SLC25A40Q8TBP6 338 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 OR2J1Q9GZK6 312 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 PLK3Q9H4B4 646 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 C5orf66Q9H5L9 145 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ZMAT3Q9HA38 289 aaKnown RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 FAM96BQ9Y3D0 163 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 MEIS3P1A6NDR6 274 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 RFPL4AA6NLU0 287 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 RFPL4AL1F8VTS6 287 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ANGPTL7O43827 346 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 YIF1AO95070 293 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 IGHV3-13P01766 116 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 THBDP07204 575 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 FPR2P25090 351 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GATA4P43694 442 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 F2RL1P55085 397 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GNG3P63215 75 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 SUPT4H1P63272 117 aaKnown RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 PYY3Q5JQD4 70 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 LIN54Q6MZP7 749 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 C6orf201Q7Z4U5 140 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 MKXQ8IYA7 352 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 PIGCQ92535 297 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 CABLES2Q9BTV7 478 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GAR1Q9NY12 217 aaKnown RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 KNTC1P50748 2209 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 hCG_1809904A0A1W2PP81 198 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 FAM230AA0A1W2PPH8 454 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 A0A1W2PR64 198 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 A0A1W2PRV1 198 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 C9orf170A2RU37 121 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 M0QYG6 137 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 BCL2L11O43521 198 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 SYNGR1O43759 233 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 LHBP01229 141 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GLP1RP43220 463 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 GPM6AP51674 278 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 UCP3P55916 312 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 TAS2R46P59540 309 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 IL15RAQ13261 267 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ALKBH6Q3KRA9 238 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ZNF573Q86YE8 665 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 MUC20Q8N307 709 aaPredicted RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 INO80EQ8NBZ0 244 aaPredicted RBP6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ST6GALNAC3Q8NDV1 305 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 OR51F2Q8NH61 342 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 NPRL2Q8WTW4 380 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 PHYHIPLQ96FC7 376 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 NEU1Q99519 415 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 HRH4Q9H3N8 390 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 RAXQ9Y2V3 346 aa6.77□□□□□ -1.33
COL21A1-212ENST00000535941 ZNF732B4DXR9 585 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 H7C1Q1 480 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 M0R036 132 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 TUSC2O75896 110 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 SNRNP70P08621 437 aaKnown RBP6.76□□□□□ -1.33
COL21A1-212ENST00000535941 OR4E1P0C645 316 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 LYL1P12980 280 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 LOXP28300 417 aaPredicted RBP6.76□□□□□ -1.33
COL21A1-212ENST00000535941 BLVRBP30043 206 aaPredicted RBP6.76□□□□□ -1.33
COL21A1-212ENST00000535941 ECI1P42126 302 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 CR1LQ2VPA4 569 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
COL21A1-212ENST00000535941 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
COL21A1-212ENST00000535941 BPIFB2Q8N4F0 458 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 OR10J5Q8NHC4 309 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 MITD1Q8WV92 249 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 WDR13Q9H1Z4 485 aa6.76□□□□□ -1.33
COL21A1-212ENST00000535941 OR51B6Q9H340 312 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms