RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 COX5AP20674 150 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF154Q13106 437 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ACSF3Q4G176 576 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 Q6P435 159 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 PCSK4Q6UW60 755 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 CLEC9AQ6UXN8 241 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 MEX3BQ6ZN04 569 aaKnown RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 BSCL2Q96G97 398 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 DKK4Q9UBT3 224 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ZDHHC8Q9ULC8 765 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 GTF3C1Q12789 2109 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 BORCS7-ASMTA0A0B4J1R7 106 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 LRP5LA4QPB2 252 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 PRR33A8MZF0 331 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 H0YL77 283 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 TUSC2O75896 110 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 GLAP06280 429 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF44P15621 663 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 SELEP16581 610 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 MPV17P39210 176 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 ID4P47928 161 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 DVL1P1P54792 670 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-202ENST00000535906 SRPXP78539 464 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 GAPTQ8N292 157 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 OR4D5Q8NGN0 318 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 GINS3Q9BRX5 216 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 RIMS4Q9H426 269 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-202ENST00000535906 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 CDIPTO14735 213 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 AGPAT2O15120 278 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 DEGS1O15121 323 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 CBR1P16152 277 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 PVALBP20472 110 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-202ENST00000535906 CD80P33681 288 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 ERVK11-1P61568 191 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 KLF14Q8TD94 323 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-202ENST00000535906 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
VPS33B-202ENST00000535906 TMEM222Q9H0R3 208 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 IFT22Q9H7X7 185 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
VPS33B-202ENST00000535906 TRBV6-6A0A0A6YYG2 114 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 FAM157AC9JC47 383 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 TM4SF5O14894 197 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 OR8U9P0C7N5 309 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 CEACAM1P13688 526 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF880Q6PDB4 577 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF565Q8N9K5 539 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 DMBX1Q8NFW5 382 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 OR8U1Q8NH10 309 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 CCL28Q9NRJ3 127 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 PLSCR4Q9NRQ2 329 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 RCL1Q9Y2P8 373 aaKnown RBP11.34□□□□□ -0.59
VPS33B-202ENST00000535906 PRELID3BQ9Y3B1 194 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 TNFSF13O75888 250 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 CDS2O95674 445 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 HEXAP06865 529 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 CTXN2P0C2S0 81 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 DANCRP0C864 163 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 SPP1P10451 314 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
VPS33B-202ENST00000535906 RND3P61587 244 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF610Q8N9Z0 462 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 KIRREL1Q96J84 757 aa11.34□□□□□ -0.59
VPS33B-202ENST00000535906 TRAV39A0A0B4J263 110 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 AHRRA9YTQ3 701 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 C9JQL5 133 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 SIRPB1O00241 398 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 HSD17B6O14756 317 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 WDR1O75083 606 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 OR2H2O95918 312 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 GRPP07492 148 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 HOXC12P31275 282 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 GNMTQ14749 295 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-202ENST00000535906 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 BOD1Q96IK1 185 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 TINAGQ9UJW2 476 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 POLDIP2Q9Y2S7 368 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 NDUFA2O43678 99 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 TSPAN15O95858 294 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 PGA5P0DJD9 388 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 NHLH2Q02577 135 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 OR8G1Q15617 311 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 SEM1Q6ZVN7 128 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 C1orf162Q8NEQ5 155 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-202ENST00000535906 PLPPR1Q8TBJ4 325 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 STARD4Q96DR4 205 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 PARP12Q9H0J9 701 aaKnown RBP11.33□□□□□ -0.6
VPS33B-202ENST00000535906 OPN3Q9H1Y3 402 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-202ENST00000535906 LUZP4Q9P127 313 aa11.33□□□□□ -0.6
VPS33B-202ENST00000535906 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-202ENST00000535906 NKX2-6A6NCS4 301 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms