RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FBXO36Q8NEA4 188 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SLC30A7Q8NEW0 376 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR51G2Q8NGK0 314 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR5L1Q8NGL2 311 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR6N1Q8NGY5 312 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR1F12Q8NHA8 337 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 CDC26Q8NHZ8 85 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SFXN5Q8TD22 340 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR5P2Q8WZ92 322 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 CDS1Q92903 461 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 PPCDCQ96CD2 204 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 TUBGCP3Q96CW5 907 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 FAM210BQ96KR6 192 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 PGLYRP4Q96LB8 373 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ARHGDIGQ99819 225 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 MRPL57Q9BQC6 102 aaKnown RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 CALML5Q9NZT1 146 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SLC17A7Q9P2U7 560 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 STX18Q9P2W9 335 aaKnown RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 RPS6KB2Q9UBS0 482 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 PCTPQ9UKL6 214 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 KPTNQ9Y664 436 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 MUC4Q99102 2169 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 IGHV3OR16-13A0A075B7E8 117 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TRAV38-1A0A0B4J264 116 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 LOC110117498-PIK3R3F6TDL0 507 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 PGRMC1O00264 195 aaKnown RBP2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TIMM8AO60220 97 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-202ENST00000535689 UPK3AO75631 287 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 AHSA1O95433 338 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 LHBP01229 141 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 IGHV1-46P01743 117 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 IGHV3-48P01763 117 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 HLA-HP01893 362 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 IFNA6P05013 189 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 PHBP35232 272 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 LEPP41159 167 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 P2RY1P47900 373 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 GDI2P50395 445 aaKnown RBP2.29□□□□□ -2.04
SNHG1-202ENST00000535689 SERPINB9P50453 376 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 GPM6AP51674 278 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TAS2R19P59542 299 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 PCBD1P61457 104 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 HPCAP84074 193 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 CAV1Q03135 178 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 IL24Q13007 206 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 GNMTQ14749 295 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 MPPED2Q15777 294 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TIGITQ495A1 244 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 RNF212Q495C1 297 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 C2orf83Q53S99 150 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 CCNJQ5T5M9 372 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 HDDC2Q7Z4H3 204 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 CALHM3Q86XJ0 350 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 SLC22A24Q8N4F4 322 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 OR13C2Q8NGS9 318 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 OR11L1Q8NGX0 322 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 OR13G1Q8NGZ3 307 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 OR6X1Q8NH79 312 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 SLC7A13Q8TCU3 470 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 ACTRT1Q8TDG2 376 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF75AQ96N20 296 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 OR7D2Q96RA2 312 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 NAPGQ99747 312 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-202ENST00000535689 PARD6BQ9BYG5 372 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 ULBP2Q9BZM5 246 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 PPA2Q9H2U2 334 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 C12orf10Q9HB07 376 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 CCNB1IP1Q9NPC3 277 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 AIG1Q9NVV5 245 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 C1orf109Q9NX04 203 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TFR2Q9UP52 801 aa2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TSSC4Q9Y5U2 329 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-202ENST00000535689 TRAV26-1A0A087WT03 109 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 A0A0J9YXY3 114 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 WI2-2373I1.2A0A1W2PRP0 233 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM72A0PK05 275 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 FAM159BA6NKW6 160 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CEACAM18A8MTB9 384 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF705EA8MWA4 302 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CENPBD1B2RD01 187 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 M0R3G1 203 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 AGPAT2O15120 278 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SNNO75324 88 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 IGHG4P01861 327 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 DBIP07108 87 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 NEFHP12036 1026 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 NQO1P15559 274 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 NCF2P19878 526 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CCNOP22674 350 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 STOMP27105 288 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CFHR2P36980 270 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CSNK1A1P48729 337 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms