RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 ZNF729A6NN14 1252 aaPredicted RBP12.81□□□□□ -0.36
CNN1-202ENST00000535659 C17orf98A8MV24 154 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 CD5LO43866 347 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 ORC5O43913 435 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 SSX5O60225 188 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 ZNF16P17020 682 aaPredicted RBP12.81□□□□□ -0.36
CNN1-202ENST00000535659 GLP1RP43220 463 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 DLX6P56179 175 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 KRTAP1-1Q07627 177 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 C6orf183Q5T699 404 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 C11orf42Q8N5U0 333 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 KIR3DL3Q8N743 410 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 SETD6Q8TBK2 473 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 ABHD1Q96SE0 405 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 Q9N2K0 584 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 KCNIP1Q9NZI2 227 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 OPN4Q9UHM6 478 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 KPTNQ9Y664 436 aa12.81□□□□□ -0.36
CNN1-202ENST00000535659 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 A0A1W2PR64 198 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 J3QLI3 93 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 M0R1W7 72 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 FCGR3AP08637 254 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 IL18Q14116 193 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 C17orf58Q2M2W7 97 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 TRAT1Q6PIZ9 186 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 Q6ZPA2 131 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 C7orf69Q9H7B7 122 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 LINC00574Q9H8X3 128 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 ZNF230Q9UIE0 474 aaPredicted RBP12.8□□□□□ -0.36
CNN1-202ENST00000535659 MGAT4AQ9UM21 535 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 ACANP16112 2415 aa12.8□□□□□ -0.36
CNN1-202ENST00000535659 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
CNN1-202ENST00000535659 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 TOX4O94842 621 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 DTYMKP23919 212 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 ETV6P41212 452 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 ERVFRD-1P60508 538 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 GUCA2AQ02747 115 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 ZFHX3Q15911 3703 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 SRSF7Q16629 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
CNN1-202ENST00000535659 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 PYHIN1Q6K0P9 492 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 Q8N7P7 452 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 RFESDQ8TAC1 157 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 SMR3AQ99954 134 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 SCPEP1Q9HB40 452 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 CALYQ9NYX4 217 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 AUP1Q9Y679 476 aa12.79□□□□□ -0.36
CNN1-202ENST00000535659 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 SULT1C2O00338 296 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 SPINT2O43291 252 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 LY6G6DO95868 133 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 RBP4P02753 201 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 CBX5P45973 191 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 SPANXN2Q5MJ10 180 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 HEPN1Q6WQI6 88 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 GCDHQ92947 438 aaPredicted RBP12.78□□□□□ -0.36
CNN1-202ENST00000535659 TMPRSS13Q9BYE2 586 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
CNN1-202ENST00000535659 KCNS2Q9ULS6 477 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 ABCA1O95477 2261 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 MMP9P14780 707 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 OMGP23515 440 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 PRTN3P24158 256 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 PTBP1P26599 531 aaKnown RBP eCLIP12.78□□□□□ -0.36
CNN1-202ENST00000535659 SSTR5P35346 364 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 HMGN3Q15651 99 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 Q6ZS49 121 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 C5orf24Q7Z6I8 188 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 PRR18Q8N4B5 295 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 FCAMRQ8WWV6 532 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 PCGF1Q9BSM1 259 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 YAE1D1Q9NRH1 226 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 V9GYH0 126 aa12.78□□□□□ -0.36
CNN1-202ENST00000535659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.36
CNN1-202ENST00000535659 MEIS3P1A6NDR6 274 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms