RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TGIF2LXQ8IUE1 241 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 C5orf56Q8N8D9 126 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 OR52M1Q8NGK5 317 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 OR52I1Q8NGK6 324 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 OR8U1Q8NH10 309 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 RHOXF1Q8NHV9 184 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 LIN7CQ9NUP9 197 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 IL36GQ9NZH8 169 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 ORC5O43913 435 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 RAMP3O60896 148 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 CDRT1O95170 752 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 THBS3P49746 956 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 TAS2R43P59537 309 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 DGCR2P98153 550 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF816Q0VGE8 651 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 Q3ZCU0 254 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 OR2W3Q7Z3T1 314 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 STPG2Q8N412 459 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 PRR18Q8N4B5 295 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 JAGN1Q8N5M9 183 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 LINC00482Q8N8I6 264 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 MRPS24Q96EL2 167 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 RDH12Q96NR8 316 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 SMPD3Q9NY59 655 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 ERGIC3Q9Y282 383 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 DSCAML1Q8TD84 2053 aa10.51□□□□□ -0.73
CLSTN3-205ENST00000535452 A0A1W2PPI3 338 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A18PA6NE21 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A16PA6NEW6 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A20PA6NIJ5 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A5PA8MXJ8 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 GEMIN2O14893 280 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 MOSP00540 346 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A15PP0C7V4 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A13PP0C7W8 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A14PP0C7W9 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM90A24PP0C7X0 464 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 HOXD3P31249 432 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 REG1BP48304 166 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 GPR50Q13585 617 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 YIF1BQ5BJH7 314 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 TCTEX1D4Q5JR98 221 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 NHLRC3Q5JS37 347 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 AWAT2Q6E213 333 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 TMEM65Q6PI78 240 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 RNF166Q96A37 237 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 SMIM19Q96E16 107 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF184Q99676 751 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 LINC00574Q9H8X3 128 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 BABAM2Q9NXR7 383 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 ETAA1Q9NY74 926 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 AASSQ9UDR5 926 aa10.5□□□□□ -0.73
CLSTN3-205ENST00000535452 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 EBAG9O00559 213 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 MYL12BO14950 172 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 CA11O75493 328 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 RGS11O94810 467 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 IGHG2P01859 326 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 AMY1AP04745 511 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 AMY2AP04746 511 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 ELANEP08246 267 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 MAPK3P27361 379 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 CD1BP29016 333 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 SOX6P35712 828 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 GTF2A1P52655 376 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 Q499Y3 187 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 TTC23Q5W5X9 447 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 IZUMO1Q8IYV9 350 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 PQLC1Q8N2U9 271 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 C8orf31Q8N9H6 132 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 PLPPR1Q8TBJ4 325 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 TMEM80Q96HE8 168 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 EAF1Q96JC9 268 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 S100A14Q9HCY8 104 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 FGF20Q9NP95 211 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 C8orf4Q9NR00 106 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 MRPS18AQ9NVS2 196 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 GFOD1Q9NXC2 390 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 LINC00527Q9UJ94 153 aa10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 MRPS28Q9Y2Q9 187 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-205ENST00000535452 IGHV3-72A0A0B4J1Y9 119 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 TRAV39A0A0B4J263 110 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 E9PI62 339 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 K7EIL1 84 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CCL24O00175 119 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CGB3P0DN86 165 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CGB7P0DN87 165 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 GABRB1P18505 474 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CAPGP40121 348 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms