RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ICAM4Q14773 271 aa13.72□□□□□ -0.21
MCF2L-232ENST00000535094 LURAP1LQ8IV03 231 aa13.72□□□□□ -0.21
MCF2L-232ENST00000535094 NPIPB13A6NJU9 1138 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 NPIPB4C9JG80 1138 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 PITX3O75364 302 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 CHRNA7P36544 502 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 RBM11P57052 281 aaKnown RBP13.71□□□□□ -0.21
MCF2L-232ENST00000535094 CCDC74BQ96LY2 380 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 EGLN1Q9GZT9 426 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 PTPRZ1P23471 2315 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-232ENST00000535094 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 MAP1LC3B2A6NCE7 125 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 SIRPB1O00241 398 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 KRASP01116 189 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 ATP5SQ99766 215 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 MAP1LC3BQ9GZQ8 125 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 PLA2G3Q9NZ20 509 aa13.71□□□□□ -0.21
MCF2L-232ENST00000535094 USF3Q68DE3 2245 aa13.71□□□□□ -0.22
MCF2L-232ENST00000535094 A0A1W2PR77 199 aa13.71□□□□□ -0.22
MCF2L-232ENST00000535094 BAXQ07812 192 aa13.71□□□□□ -0.22
MCF2L-232ENST00000535094 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.22
MCF2L-232ENST00000535094 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.22
MCF2L-232ENST00000535094 C18orf12Q96KH6 178 aa13.71□□□□□ -0.22
MCF2L-232ENST00000535094 GPR87Q9BY21 358 aa13.71□□□□□ -0.22
MCF2L-232ENST00000535094 PTBP3O95758 552 aaKnown RBP13.7□□□□□ -0.22
MCF2L-232ENST00000535094 SUCLG1P53597 346 aaKnown RBP13.7□□□□□ -0.22
MCF2L-232ENST00000535094 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-232ENST00000535094 NOSIPQ9Y314 301 aaKnown RBP13.7□□□□□ -0.22
MCF2L-232ENST00000535094 V9GYS6 101 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 CCL1P22362 96 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 HBG1P69891 147 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 HBG2P69892 147 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 H3F3AP84243 136 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 RRP8O43159 456 aaKnown RBP13.7□□□□□ -0.22
MCF2L-232ENST00000535094 GLIPR1P48060 266 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 PLP2Q04941 152 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 RTP5Q14D33 572 aa13.7□□□□□ -0.22
MCF2L-232ENST00000535094 KIR2DS1A0A191URI9 304 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF737O75373 536 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 KIR2DS4P43632 304 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 PRDX4Q13162 271 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 KIR2DS1Q14954 304 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 OR13D1Q8NGV5 346 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 ATG101Q9BSB4 218 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 FOXD3Q9UJU5 478 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-232ENST00000535094 NDUFB7P17568 137 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 TAS2R30P59541 319 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 RSPO1Q2MKA7 263 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-232ENST00000535094 FGFBP3Q8TAT2 258 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 ADGRG7Q96K78 797 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 ANGPTL4Q9BY76 406 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 FUT9Q9Y231 359 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-232ENST00000535094 PRR14LQ5THK1 2151 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 STARD6P59095 220 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 PCBD1P61457 104 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 FAM27BQ5VT28 67 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 CPT1CQ8TCG5 803 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 FAM234AQ9H0X4 552 aa13.69□□□□□ -0.22
MCF2L-232ENST00000535094 CLEC18AA5D8T8 446 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 GJE1A6NN92 205 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM50AO95807 157 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 CLDN15P56746 228 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 SPSB3Q6PJ21 355 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF705AQ6ZN79 300 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-232ENST00000535094 CLEC18CQ8NCF0 446 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 Q9N2K0 584 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 ANAPC10Q9UM13 185 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 HSPB1P04792 205 aaKnown RBP13.68□□□□□ -0.22
MCF2L-232ENST00000535094 EGR1P18146 543 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 DSCR4P56555 118 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF816Q0VGE8 651 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-232ENST00000535094 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 BCL2P10415 239 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 PSMB3P49720 205 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF574Q6ZN55 896 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-232ENST00000535094 FAM185AQ8N0U4 392 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 OR10D3Q8NH80 312 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 GPR146Q96CH1 333 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 MALSU1Q96EH3 234 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 HS3ST6Q96QI5 342 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 RBKSQ9H477 322 aa13.68□□□□□ -0.22
MCF2L-232ENST00000535094 OR6C6A6NF89 314 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 PLA2G5P39877 138 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 GALR1P47211 349 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 UNQ6494/PRO21346Q6UXR6 183 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 OR4D5Q8NGN0 318 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 CLDND2Q8NHS1 167 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM38BQ9NVV0 291 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms