RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RPRMQ9NS64 109 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 SIGLEC8Q9NYZ4 499 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 JKAMPQ9P055 326 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 OR1A1Q9P1Q5 309 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 KCNS2Q9ULS6 477 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 VDAC3Q9Y277 283 aa4.47□□□□□ -1.69
SNHG1-201ENST00000535076 YARS2Q9Y2Z4 477 aaKnown RBP4.47□□□□□ -1.69
SNHG1-201ENST00000535076 COL1A1P02452 1464 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 A0A1W2PRD5 423 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TCRBV5S4A2TA0A5A2 114 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ASPDHA6ND91 283 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 MYADML2A6NDP7 307 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 MSGN1A6NI15 193 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 F8W1H4 67 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 H7C1C5 153 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 J3KT08 172 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SAP18O00422 153 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 EDIL3O43854 480 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 OR7C1O76099 320 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SFT2D2O95562 160 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 GPANK1O95872 356 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 MOSP00540 346 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TIMP1P01033 207 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 CRYAAP02489 173 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SBK3P0C264 359 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 LINC00032P0C843 101 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 DANCRP0C864 163 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 LINC00869P0C866 280 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 NPPBP16860 134 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 IGFBP2P18065 325 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PPIBP23284 216 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 GATA3P23771 443 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 RPS12P25398 132 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 DRD3P35462 400 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ZNF93P35789 620 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 CA7P43166 264 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ZFP36L2P47974 494 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 CXCL12P48061 93 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 REG1BP48304 166 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 P2RX1P51575 399 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 POLR2JP52435 117 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 FOXA1P55317 472 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TIRAPP58753 221 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SIRPAP78324 504 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 HLA-DRB3P79483 266 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 RAB40BQ12829 278 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 KLRD1Q13241 179 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 LYPLAL1Q5VWZ2 237 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SLC18B1Q6NT16 456 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 Q6Q795 121 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ARL9Q6T311 187 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 BHLHA9Q7RTU4 235 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 C16orf82Q7Z2V1 217 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ERASQ7Z444 233 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ADGRE4PQ86SQ3 457 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PIP4P1Q86T03 277 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 C17orf64Q86WR6 236 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 APRG1Q8IVJ8 170 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SLC35F2Q8IXU6 374 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 OSR2Q8N2R0 312 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 MUC20Q8N307 709 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 IQCF1Q8N6M8 205 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ZDHHC22Q8N966 263 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 OR2T33Q8NG76 320 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 OR8S1Q8NH09 359 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PTPMT1Q8WUK0 201 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TWIST2Q8WVJ9 160 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 NEUROG1Q92886 237 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TSSK2Q96PF2 358 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 DERL3Q96Q80 235 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 GPER1Q99527 375 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SPIN2AQ99865 258 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SPIN2BQ9BPZ2 258 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 RERGLQ9H628 205 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ST20Q9HBF5 79 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 BPIFA1Q9NP55 256 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 AMBNQ9NP70 447 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 NUDT4Q9NZJ9 180 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 FLRT3Q9NZU0 649 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 THYN1Q9P016 225 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 OR5V1Q9UGF6 321 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 TESQ9UGI8 421 aaKnown RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 IL36AQ9UHA7 158 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 ANXA10Q9UJ72 324 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 FOXA2Q9Y261 457 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 V9GYY9 64 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PARP14Q460N5 1801 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 PATJQ8NI35 1801 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SNED1Q8TER0 1413 aa4.46□□□□□ -1.7
SNHG1-201ENST00000535076 SIPA1L3O60292 1781 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-201ENST00000535076 KIDINS220Q9ULH0 1771 aa4.45□□□□□ -1.7
SNHG1-201ENST00000535076 DLEC1Q9Y238 1755 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms