RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF707Q96C28 371 aaPredicted RBP-0.55□□□□□ -2.5
COPB1-212ENST00000534771 QKIQ96PU8 341 aaKnown RBP eCLIP-0.55□□□□□ -2.57e-9■■■■■ 37.3
COPB1-212ENST00000534771 MGLLQ99685 303 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 LRRC40Q9H9A6 602 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 HYPKQ9NX55 129 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 TFR2Q9UP52 801 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 SLC22A14Q9Y267 594 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 FAM215AQ9Y5M1 114 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 TMEM131Q92545 1883 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ARFGEF3Q5TH69 2177 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ALPK2Q86TB3 2170 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ANK2Q01484 3957 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 NUMA1Q14980 2115 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 SBNO1A3KN83 1393 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 BDP1A6H8Y1 2624 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 FLNAP21333 2647 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TRGV5A0A0B4J1U4 118 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 PGPA6NDG6 321 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 NDC80O14777 642 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TCAPO15273 167 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ALOX12BO75342 701 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 HLA-HP01893 362 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 CATP04040 527 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 IFNW1P05000 195 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TACSTD2P09758 323 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ZNF728P0DKX0 622 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 IGHV3-30-3P0DP02 117 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 RNASE3P12724 160 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 GTF2H1P32780 548 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 GABRA3P34903 492 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TOMM34Q15785 309 aaPredicted RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 SSX2Q16385 188 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 GABRA6Q16445 453 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ARHGAP11BQ3KRB8 267 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 Q499Y3 187 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 MRPL51Q4U2R6 128 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 SPINK9Q5DT21 86 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 NXNL2Q5VZ03 156 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 OR10K2Q6IF99 312 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 KTN1-AS1Q86SY8 53 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ZNF565Q8N9K5 539 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 EIF1ADQ8N9N8 165 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TMEM234Q8WY98 164 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ELMO1Q92556 727 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 SLC38A4Q969I6 547 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 C8orf44Q96CB5 159 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 JSRP1Q96MG2 331 aaPredicted RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 GSDMAQ96QA5 445 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TGS1Q96RS0 853 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 HBEGFQ99075 208 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 DOHHQ9BU89 302 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 TRABDQ9H4I3 376 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 MRPS30Q9NP92 439 aaKnown RBP-0.56□□□□□ -2.5
COPB1-212ENST00000534771 ADA2Q9NZK5 511 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 RBM12B-AS1Q9P1G2 102 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 LAMA5O15230 3695 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 CREBBPQ92793 2442 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 FREM1Q5H8C1 2179 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 SMARCA4P51532 1647 aa-0.56□□□□□ -2.5
COPB1-212ENST00000534771 NRCAMQ92823 1304 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 IGHV3-64A0A075B6Q5 118 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 HMSDA8MTL9 139 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 HACD1B0YJ81 288 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 C9J4A7 227 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 H0YCG3 227 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 C19orf84I3L1E1 186 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 M0QXV9 152 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 BCKDKO14874 412 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 LSM1O15116 133 aaKnown RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 SPAG6O75602 509 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 FTH1P02794 183 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 SERPINA7P05543 415 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 BPGMP07738 259 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 KRT16P08779 473 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 CECR9P0C854 216 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 CRHBPP24387 322 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 POLR2FP61218 127 aaKnown RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 C5orf64Q2M2E5 130 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 CEP55Q53EZ4 464 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 RASL11AQ6T310 242 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 UGT2A3Q6UWM9 527 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 EXOC3-AS1Q8N2X6 119 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 SLC22A24Q8N4F4 322 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 NECAB1Q8N987 351 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 OR52M1Q8NGK5 317 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 OR4C6Q8NH72 309 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 NT5CQ8TCD5 201 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 CASTOR1Q8WTX7 329 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 SYAP1Q96A49 352 aaPredicted RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 TAMM41Q96BW9 452 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 LINC01587Q99440 93 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 TBX5Q99593 518 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 FAM103A1Q9BTL3 118 aaKnown RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 FAAP24Q9BTP7 215 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 C20orf24Q9BUV8 137 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 VCX3BQ9H321 246 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 WDR55Q9H6Y2 383 aaPredicted RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 C6orf50Q9HD87 102 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 CD209Q9NNX6 404 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms